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The map label for this gene is yedO

Identifier: 218699517

GI number: 218699517

Start: 1207409

End: 1208395

Strand: Direct

Name: yedO

Synonym: ECIAI39_1136

Alternate gene names: 218699517

Gene position: 1207409-1208395 (Clockwise)

Preceding gene: 218699516

Following gene: 218699518

Centisome position: 23.53

GC content: 53.5

Gene sequence:

>987_bases
ATGCCACTGCATAATTTAACCCGTTTTCCACGGCTGGAGTTTATCGGCGCGCCAACGCCGCTCGAATATCTGCCGCGCTT
TTCTGATTATCTTGGACGAGAAATTTTCATCAAACGGGATGACGTCATTCCCATGGCAATGGGCGGCAATAAATTACGTA
AGCTGGAATTTCTCGCGGCAGATGCTCTGCGTGAAGGTGCCGATACGCTGATTACTGCCGGGGCGATCCAGTCTAACCAT
GTGCGCCAGACTGCCGCAGTCGCTGCGAAACTCGGTCTGCATTGCGTGGCGCTGCTGGAAAATCCTATTGGTACAACCGC
GGAAAACTATTTAACCAACGGCAATCGTTTGTTGCTGGATCTGTTCAATACCCAGATTGAAATGTGCGACGCACTGACCG
ATCCCAATACCCAACTGGAAGAGCTGGCGACGCGAGTCGAAGCACAAGGCTTTCGCCCGTATGTCATTCCGGTTGGCGGT
TCTAATGCTTTGGGCGCGCTGGGTTATGTGGAGAGTGCGCTGGAAATCGCGCAACAGTGTGAAGGGGCGGTTAATATTTC
GTCGGTGGTGGTCGCATCGGGCAGTGCCGGAACTCACGCCGGACTGGCTGTTGGGCTGGAACACCTGATGCCTGAAAGCG
AACTGATTGGCGTGACTGTGTCGCGTTCTGTTGCCGATCAATTGCCGAAAGTGGTTAACCTCCAACAGGCGATTGCGAAA
GAACTGGAGCTGACCGCATCAGCGGAAATTTTACTCTGGGATGACTATTTTGCACCTGGCTACGGCGTGCCGAACGACGA
AGGCATGGAAGCAGTGAAATTGCTGGCGCGGCTGGAAGGCATTCTGCTTGATCCTGTGTATACCGGAAAAGCGATGGCGG
GGCTGATTGACGGTATCAGTCAGAAACGCTTCAAAGATGAAGGGCCGATTTTGTTTATTCATACCGGCGGTGCGCCTGCG
CTGTTCGCCTATCATCCCCACGTTTAG

Upstream 100 bases:

>100_bases
CATAATGACAAAAAAGGGCGCTTTCACTAGCGCCTTTTTTATTTACGCGTTTTCAGCGTGCATAATAAGAAAATCACAAC
AACACACATCGGAGGCTGTT

Downstream 100 bases:

>100_bases
CTCCGGGAACGCTCATGCAAGAAAGTATACAACTGGTTATTGATTCCTTGCCGTTCCTGCTGAAAGGGGCTGGGTATACG
CTGCAACTCAGTATCGGCGG

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVIPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNH
VRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNTQLEELATRVEAQGFRPYVIPVGG
SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPA
LFAYHPHV

Sequences:

>Translated_328_residues
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVIPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNH
VRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNTQLEELATRVEAQGFRPYVIPVGG
SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPA
LFAYHPHV
>Mature_327_residues
PLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVIPMAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHV
RQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALTDPNTQLEELATRVEAQGFRPYVIPVGGS
NALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAKE
LELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPAL
FAYHPHV

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=328, Percent_Identity=99.390243902439, Blast_Score=663, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35196; Mature: 35065

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVIPMAMGGNKLRKLEFLAA
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHH
DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD
HHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEE
LFNTQIEMCDALTDPNTQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS
HHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
QKRFKDEGPILFIHTGGAPALFAYHPHV
HHHCCCCCCEEEEECCCCCEEEEECCCC
>Mature Secondary Structure 
PLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVIPMAMGGNKLRKLEFLAA
CCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHH
DALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLD
HHHHCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEE
LFNTQIEMCDALTDPNTQLEELATRVEAQGFRPYVIPVGGSNALGALGYVESALEIAQQC
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
EGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGVTVSRSVADQLPKVVNLQQAIAK
CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
ELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLARLEGILLDPVYTGKAMAGLIDGIS
HHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHH
QKRFKDEGPILFIHTGGAPALFAYHPHV
HHHCCCCCCEEEEECCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA