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The map label for this gene is yodD

Identifier: 218699486

GI number: 218699486

Start: 1181523

End: 1181750

Strand: Reverse

Name: yodD

Synonym: ECIAI39_1103

Alternate gene names: 218699486

Gene position: 1181750-1181523 (Counterclockwise)

Preceding gene: 218699488

Following gene: 218699485

Centisome position: 23.03

GC content: 48.68

Gene sequence:

>228_bases
ATGAAAACCGCAAAAGAGTACAGCGATACCGCAAAACGTGAGGTCAGCGTCGATGTCGATGCCCTGCTGGCGGCGATCAA
TGAAATTAGCGAAAGCGAAGTTCATCGCAGCCAGAACGATTCTGAACACGTTAGCGTCGATGGACGTGAATATCATACAT
GGCGTGAATTGGCGGATGCCTTCGAACTGGATATTCATGACTTCAGCGTCTCTGAAGTGAATCGTTGA

Upstream 100 bases:

>100_bases
GCGCGCGAGTGCTGATTTTCTCGACGGTCTATACTTAAGAGATGCCAGGCGGACTTAACGACTGGCGGCAACAACAGAGT
AACGGTTGCGAGGAAAGATG

Downstream 100 bases:

>100_bases
ATGCACAATAAAAAATCCCGACCCTGAGGGGGTCGGGATGAAACTTGCTTAAGCAAGAAGCACTTAAAAAATTCGTTACA
CCAGGAAATCTGATGTGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADAFELDIHDFSVSEVNR

Sequences:

>Translated_75_residues
MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADAFELDIHDFSVSEVNR
>Mature_75_residues
MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADAFELDIHDFSVSEVNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082006, Length=75, Percent_Identity=100, Blast_Score=150, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YODD_ECOL6 (P64520)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_754264.1
- EnsemblBacteria:   EBESCT00000041381
- GeneID:   1037051
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c2372
- GeneTree:   EBGT00050000011127
- HOGENOM:   HBG417354
- OMA:   ISESEIH
- ProtClustDB:   CLSK880248
- InterPro:   IPR019669

Pfam domain/function: PF10733 DUF2525

EC number: NA

Molecular weight: Translated: 8579; Mature: 8579

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADA
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH
FELDIHDFSVSEVNR
HHCCCCCCCHHCCCC
>Mature Secondary Structure
MKTAKEYSDTAKREVSVDVDALLAAINEISESEVHRSQNDSEHVSVDGREYHTWRELADA
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHH
FELDIHDFSVSEVNR
HHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157