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The map label for this gene is yodC

Identifier: 218699482

GI number: 218699482

Start: 1178367

End: 1178549

Strand: Direct

Name: yodC

Synonym: ECIAI39_1099

Alternate gene names: 218699482

Gene position: 1178367-1178549 (Clockwise)

Preceding gene: 218699481

Following gene: 218699483

Centisome position: 22.96

GC content: 51.91

Gene sequence:

>183_bases
ATGAGCTTTATGGTTAGTGAGGAAGTTACGGTTAAAGAGGGCGGCCCGCGGATGATTGTCACTGGATACTCCAGCGGTAT
GGTTGAGTGTCGTTGGTATGACGGTTACGGGGTCAAGCGGGAAGCTTTTCATGAAACCGATCTTGTTCCGGGGGAGGGGA
GTCGTTCTGCGGAAGAAGTTTGA

Upstream 100 bases:

>100_bases
AATGCGCGGTCAGGCACATTAATACTCGCACTGGCTATTATGCAAAATTCGCCATCTTCAACTAAGGTGAACAAGTTTCA
CTCGAAAAAAGGAGGCGAGT

Downstream 100 bases:

>100_bases
AAGGGTATCATTAACACCAGGCCGGATCACATCCGGCCTGGTGTCCCAATGCCTGCAATGAATGATAGTCGCGTCTTATC
ATGCCACCATTATAAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETDLVPGEGSRSAEEV

Sequences:

>Translated_60_residues
MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETDLVPGEGSRSAEEV
>Mature_59_residues
SFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETDLVPGEGSRSAEEV

Specific function: Unknown

COG id: COG5475

COG function: function code S; Uncharacterized small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788267, Length=60, Percent_Identity=98.3333333333333, Blast_Score=120, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019226 [H]

Pfam domain/function: PF09926 DUF2158 [H]

EC number: NA

Molecular weight: Translated: 6665; Mature: 6533

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETDLVPGEGSRSAEEV
CCEECCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFHETDLVPGEGSRSAEEV
CEECCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]