| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218699208
Identifier: 218699208
GI number: 218699208
Start: 861483
End: 861812
Strand: Reverse
Name: 218699208
Synonym: ECIAI39_0812
Alternate gene names: NA
Gene position: 861812-861483 (Counterclockwise)
Preceding gene: 218699209
Following gene: 218699200
Centisome position: 16.79
GC content: 45.15
Gene sequence:
>330_bases ATGAGCGATAAATTACAAATGATGCTGGAAGATGCAAAGGAACTGAATGCACTGGGCCTGATGTCTGATAGTGAAGTTGA TGCCATTGCCGTCATGGTCAAAGCTCGTGAAGTCAGCGCCCGTATAGCCAAAGTCAAATCAATGACGGGTGAAGAGATCA AAGCCATCCGCACCCGATACGGCATGTCACAATCCGTGCTGGCACATACAATGGGAATGTCAAAAGAAAGTGTCTCGAAA TGGGAACGTAATGAAATAAAACCGAGCGGCCCGGCATTACGTATTTTGAATACATTGGCAATAAAAGGGCCGGAAGTTTT TGCAAAGTAA
Upstream 100 bases:
>100_bases GAACTGGCGGCCTACAAAAAAATGGCAAATGCATTTCTGGCCTTTAGCAATAAGCAAATAGAGGATTTGATCGAAACTGG CTTTTTGATTGAGGTGAAAA
Downstream 100 bases:
>100_bases AATGTTTGCAAATGATTTACCACATTCATTAGTACCCCTTGATTAAGGGGTACTAACACTATTCTAATTCTACTGCCAGC TAATCTGTGCCCTGCCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESVSK WERNEIKPSGPALRILNTLAIKGPEVFAK
Sequences:
>Translated_109_residues MSDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESVSK WERNEIKPSGPALRILNTLAIKGPEVFAK >Mature_108_residues SDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRYGMSQSVLAHTMGMSKESVSKW ERNEIKPSGPALRILNTLAIKGPEVFAK
Specific function: Unknown
COG id: COG2944
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11982; Mature: 11851
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRY CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GMSQSVLAHTMGMSKESVSKWERNEIKPSGPALRILNTLAIKGPEVFAK CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCC >Mature Secondary Structure SDKLQMMLEDAKELNALGLMSDSEVDAIAVMVKAREVSARIAKVKSMTGEEIKAIRTRY CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH GMSQSVLAHTMGMSKESVSKWERNEIKPSGPALRILNTLAIKGPEVFAK CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA