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The map label for this gene is ybiM

Identifier: 218699180

GI number: 218699180

Start: 826584

End: 826988

Strand: Reverse

Name: ybiM

Synonym: ECIAI39_0784

Alternate gene names: 218699180

Gene position: 826988-826584 (Counterclockwise)

Preceding gene: 218699182

Following gene: 218699179

Centisome position: 16.11

GC content: 46.42

Gene sequence:

>405_bases
ATGCATATCATTGATTTGTCTTGTTTTGTAAAAATATATCGTTCAAAAAACAAGCACATCTCTGTCAATTTTTTGCGTCA
TTTTCATCGCCCAGGCGACCTACACTTATCAGGCACTACCCGTTGTATTTATGAGGATGTCATTATGAAAAAGTGCCTCA
CACTACTGATTGCCACCGTCCTGAGCGGAATCTCTCTCACGGCTTATGCCGCGCAACCGATGAGTAACCTGGACAGCGGT
CAGCTACGGCCCGCCGGTACCGTTTCGGCAACTGGCGCATCAAACCTAAGCGATCTGGAGGATAAACTGGCAGAAAAAGC
GCGCGAACAAGGCGCGAAAGGTTATGTCATTAATTCCGCAGGCGGAAATGACCAGATGTTCGGTACTGCAATCATCTACA
AATAA

Upstream 100 bases:

>100_bases
CCCGCATAACGCGACAGGGTAAATATCTGGCTGCGTTTATCATTTCTATAAACCTTCACATGGCTATGGTTTATGGCAAT
TCATCATAAAAATCAGCATT

Downstream 100 bases:

>100_bases
CCCCACCAACGTAACTGCATTCGCCTCTGGATGCAGTTTTCGTCCGATTTGTAAGCAAAAAACATCAAATATGAACGCAA
TGTAAATAAATGTATTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHIIDLSCFVKIYRSKNKHISVNFLRHFHRPGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGISLTAYAAQPMSNLDSG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTAIIYK

Sequences:

>Translated_134_residues
MHIIDLSCFVKIYRSKNKHISVNFLRHFHRPGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGISLTAYAAQPMSNLDSG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTAIIYK
>Mature_134_residues
MHIIDLSCFVKIYRSKNKHISVNFLRHFHRPGDLHLSGTTRCIYEDVIMKKCLTLLIATVLSGISLTAYAAQPMSNLDSG
QLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSAGGNDQMFGTAIIYK

Specific function: Affects biofilm formation and mucoidy [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=98.8372093023256, Blast_Score=172, Evalue=6e-45,
Organism=Escherichia coli, GI1787355, Length=86, Percent_Identity=43.0232558139535, Blast_Score=69, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 14602; Mature: 14602

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIIDLSCFVKIYRSKNKHISVNFLRHFHRPGDLHLSGTTRCIYEDVIMKKCLTLLIATV
CEEEHHHHHHHHHHCCCCEEEHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSA
HCCCCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
GGNDQMFGTAIIYK
CCCCCCEEEEEEEC
>Mature Secondary Structure
MHIIDLSCFVKIYRSKNKHISVNFLRHFHRPGDLHLSGTTRCIYEDVIMKKCLTLLIATV
CEEEHHHHHHHHHHCCCCEEEHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
LSGISLTAYAAQPMSNLDSGQLRPAGTVSATGASNLSDLEDKLAEKAREQGAKGYVINSA
HCCCCHHHHHCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
GGNDQMFGTAIIYK
CCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]