Click here to switch to the map view.

The map label for this gene is ybcI

Identifier: 218698894

GI number: 218698894

Start: 523805

End: 524326

Strand: Reverse

Name: ybcI

Synonym: ECIAI39_0492

Alternate gene names: 218698894

Gene position: 524326-523805 (Counterclockwise)

Preceding gene: 218698895

Following gene: 218698890

Centisome position: 10.22

GC content: 53.83

Gene sequence:

>522_bases
ATGCCAACCGTTATTACGCACGCCGCCGTTCCCCTTTGCATTGCTTTAGGGTTGGGTTCGAAAGTCATCCCTCCGCGCCT
GTTATTTGCCGGAATCATCCTGGCGATGCTGCCCGATGCCGACGTCTTGTCGTTTAAATTTGGCGTTGCTTACGGCAATG
TTTTTGGTCATCGCGGGTTTACCCATTCGCTGGTGTTTGCGTTTGTTGTCCCGCTGTTATGTGCGCTGATTGGACGCCGA
TGGTTCAGGGCTGGGCTGATTCGCTGCTGGCTGTTTTTAACCGTCTCGTTGCTATCGCACAGCTTGCTGGATTCGGTAAC
CACTGGCGGTAAAGGCGTTGGCTGGCTGTGGCCGTGGTCAGATGAACGCTTTTTCGCCCCCTGGCAGGTGATTAAAGTCG
CGCCGTTTGCATTGTCTCGTTACACCACACCGTACGGGCATCAGGTGATAATTTCTGAATTGATCTGGGTGTGGTTGCCG
GGGATGCTACTGATGGGAATGTTGTGGTGGCGCAGACGATAA

Upstream 100 bases:

>100_bases
CCCGGCCTGTAACAACAGGCCGGTTCTCTTTTCAGACTGTTGCCCTCTACGCCCCGTTCATCCATGCTGATAGCATCGAC
ATTTTGCCGAAGCGACCATC

Downstream 100 bases:

>100_bases
CCGGATGCGAAAACTCGCATCCGGCAATAGCGCAATTACTTACGACGCCAGGTGGTCCCTTGCGGGCCATCTTCCAGCAC
GATCCCCATCTCGTTAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MPTVITHAAVPLCIALGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCALIGRR
WFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELIWVWLP
GMLLMGMLWWRRR

Sequences:

>Translated_173_residues
MPTVITHAAVPLCIALGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCALIGRR
WFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELIWVWLP
GMLLMGMLWWRRR
>Mature_172_residues
PTVITHAAVPLCIALGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCALIGRRW
FRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELIWVWLPG
MLLMGMLWWRRR

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786738, Length=173, Percent_Identity=97.6878612716763, Blast_Score=315, Evalue=7e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007404 [H]

Pfam domain/function: PF04307 DUF457 [H]

EC number: NA

Molecular weight: Translated: 19465; Mature: 19333

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVITHAAVPLCIALGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGF
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH
THSLVFAFVVPLLCALIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DERFFAPWQVIKVAPFALSRYTTPYGHQVIISELIWVWLPGMLLMGMLWWRRR
CCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTVITHAAVPLCIALGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGF
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCH
THSLVFAFVVPLLCALIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DERFFAPWQVIKVAPFALSRYTTPYGHQVIISELIWVWLPGMLLMGMLWWRRR
CCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7567469 [H]