| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is yaiT [H]
Identifier: 218698723
GI number: 218698723
Start: 339574
End: 342483
Strand: Reverse
Name: yaiT [H]
Synonym: ECIAI39_0309
Alternate gene names: 218698723
Gene position: 342483-339574 (Counterclockwise)
Preceding gene: 218698727
Following gene: 218698722
Centisome position: 6.67
GC content: 45.09
Gene sequence:
>2910_bases ATGCACTCCTGGAAAAAGAAACTTGTAGTATCACAATTAGCATTGGCTTGCACTCTGGCTATCACCTCTCAGGCTAATGC AACTACTTATGACACCTGGACATATGTCGATAACGCGGCTACTGGTCTTAACTGGACCAATATGGATAATCCGGGCACTG TAGACGGTAACTATGTGAATTATAGTGGCTTTGTCTACTATAACAACACCAATGGCGACTTCGATCAGTCTTTTAACGGT GATACTGTTAACGGCACGATTTCTACATATTATCTGAACCACGACTACACTGATGGTACAAATGGCAATGCTAACCAGCT TGATATTGCTAATTCAGTAATTCACGGCTCAATCACTTCTATGCTGCCTGGTGGTGATCTCTGGCATAATAATGCTTATG ATCAAAGCTATGGCTACATTCAGGCTGGTGATACAGTTATTGATACAACGTGGTATGACGGTGATGTATTCACTCTGAAT ATTGCTAACTCCACTATTGATGATGACTATGAAGCACTTTACTTTACTGATTACTACAAAGATGGCGATGTAACTAAATC TACTAACGGCACTTTTGACGTTAGCGAAGGCGTTGCTGTTAATCTTAATGTAGAAAGTAACATCAATATCTCCAATAACT CCCGTGTTGCAGGTATTGCGTTATCTCAAGGTAGTACTTACAACAATACTTACACTACAGAATCCCATACTTGGGATAAC AATATTAATGTCTCTAACTCAACCGTAACCACCGGTTCAAATACCGTGTTGGAAAGTTCTGGTTATGGTCATTTCGGTAA CTCTGGTGAGCCGAGTGATTATGCTGGTCCGGGTGACGTTGCATTGTCTTTCACTGACAGTACTTCAGACTATGCAATGA AGAACAATGTATATTTCAGCAATTCTACTCTGGTGGGTGATGTTGCGTTTACCAGCACCTGGAATGCTAATTTTGATCCA AGTGGTCATGATTCTAACGGTGACGGCGTAAAAGATACCAATGCTGGTTGGGTTGATGATAGCCTGAACGTTGATGAGCT GAATATTACTCTTGATAATGGAAGCAAGTGGGTTGGACAGGCTACATTCAATGCTGAAACCATTTCTCCAGACACAATGT ATGATGTTGCAACTAACAGTTTGACCCCTGGTGGAACAGCTGAAGCTAATGGTTGGAATCGCATCATCGATAATAAAGTA TTCCAGAGTGGTGTATTTAACGTAGCGTTGAACAACGGTTCTGAATGGGATACTACAGGTCGTTCCGTCGTTGATACCTT GACAGTTAATAATGCTTCTCAGGTTAATGTTTCGGAATCTAAATTAACTTCAGATACTATCGATTTAACTAACGGTTCTT CGCTGAACATTGGTGAAGATGGTTACGTTGATACCGATCATCTGACTATTAACTCCTACAGTACTGTTGCGTTGACCGAA TCTACAGGTTGGGGTGCTGATTACAACCTGTACGCCAATACCATCACCGTAACTAACGGTGGTGTATTGGATGTGAACGT TGATCAGTTCGATACTGAAGCTTTCCGTACTGACAAACTGGAACTGACCAGCGGCAACATTGCTGACAATAATGGTAATG TAGTATCCGGTGTATTCGATATCCACAGCAGCGATTATGTTCTGAACGCTGACTTGGTGAACGACCGTACCTGGGATACT TCCAAGTCTAACTACGGCTACGGTATTGTTGCTATGAACTCTGATGGTCATCTGACTATCAATGGTAACGGCGACATGAA CAACGGCGACGAACTGGATAACAGCTCTGTAGACAACGTTGTTGCTGCAACCGGTAACTATAAAGTTCGTATCGACAACG CAACTGGCGCTGGCGCAATCGCTGATTACAAAGATAAAGAAATTATCTACGTAAACGACGTCAACAGCAACGCGACCTTC TCTGCTGCTAACAAAGCTGACCTGGGTGCATACACCTATCAGGCTGAACAGCGTGGTAACACCGTTGTTCTGCAACAGAT GGAGCTGACCGACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCG TTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGCTGATAACGGCGGCGCATGGGTAAGCTACTTCGGTGGTAACTTC AACGGCGACAACGGCACCATCAACTATGATCAGGATGTTAACGGCATCATGGTCGGTGTTGATACCAAAATTGACGGTAA CAACGCTAAGTGGATCGTCGGTGCGGCTGCAGGCTTCGCTAAAGGTGACATGAATGACCGTTCTGGTCAGGTGGATCAAG ACAGCCAGACTGCCTACATCTACTCTTCTGCTCACTTCGCGAACAACGTCTTTGTTGATGGTAGCTTGAGCTACTCTCAC TTCAACAACGACCTGTCTGCAACCATGAGCAACGGTACTTATGTTGACGGTAGCACCAACTCCGACGCTTGGGGCTTTGG TTTGAAAGCCGGTTACGACTTCAAACTGGGTGATGCAGGTTACGTGACTCCTTACGGCAGCGTTTCTGGTCTGTTCCAGT CTGGTGATGACTACCAGCTGAGCAACAACATGAAAGTTGACGGTCAGTCTTACGACAGCATGCGTTATGAACTGGGTGTA GATGCAGGTTATACCTTCACCTACAGCGAAGACCAGGCTCTGACTCCGTACTTCAAACTGGCTTACGTTTACGACGACTC TAACAACCATAACGATGTGAACGGTGATTCCATCGATAACGGTACTGAAGGGTCTGCGGTACGTGTTGGTCTGGGTACTC AGTTCAGCTTCACCAAGAACTTCAGCGCCTATACCGATGCTAACTACCTCGGTGGTGGTGACGTAGATCAAGACTGGTCC GCGAACGTGGGTGTTAAATATACCTGGTAA
Upstream 100 bases:
>100_bases CTCAATAACGCCGCATAATCGTTAGCGCGAAACATAATATGTTTTCTATGCATTGATAATTGATGGATCAACTTATTACG TCCCTGAGGAGGGATGACAA
Downstream 100 bases:
>100_bases TATTCTTCACTCTGAAGAAATAGGTTATTTAATCTAAATAATGCCCGTCAAGGATTTGACGGGCATTACTGCAAAGGACG CGCAAATGTTATCTGTAGTT
Product: putative flagellin-like structural protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 969; Mature: 969
Protein sequence:
>969_residues MHSWKKKLVVSQLALACTLAITSQANATTYDTWTYVDNAATGLNWTNMDNPGTVDGNYVNYSGFVYYNNTNGDFDQSFNG DTVNGTISTYYLNHDYTDGTNGNANQLDIANSVIHGSITSMLPGGDLWHNNAYDQSYGYIQAGDTVIDTTWYDGDVFTLN IANSTIDDDYEALYFTDYYKDGDVTKSTNGTFDVSEGVAVNLNVESNINISNNSRVAGIALSQGSTYNNTYTTESHTWDN NINVSNSTVTTGSNTVLESSGYGHFGNSGEPSDYAGPGDVALSFTDSTSDYAMKNNVYFSNSTLVGDVAFTSTWNANFDP SGHDSNGDGVKDTNAGWVDDSLNVDELNITLDNGSKWVGQATFNAETISPDTMYDVATNSLTPGGTAEANGWNRIIDNKV FQSGVFNVALNNGSEWDTTGRSVVDTLTVNNASQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTE STGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADNNGNVVSGVFDIHSSDYVLNADLVNDRTWDT SKSNYGYGIVAMNSDGHLTINGNGDMNNGDELDNSSVDNVVAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATF SAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNF NGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSH FNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNNMKVDGQSYDSMRYELGV DAGYTFTYSEDQALTPYFKLAYVYDDSNNHNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS ANVGVKYTW
Sequences:
>Translated_969_residues MHSWKKKLVVSQLALACTLAITSQANATTYDTWTYVDNAATGLNWTNMDNPGTVDGNYVNYSGFVYYNNTNGDFDQSFNG DTVNGTISTYYLNHDYTDGTNGNANQLDIANSVIHGSITSMLPGGDLWHNNAYDQSYGYIQAGDTVIDTTWYDGDVFTLN IANSTIDDDYEALYFTDYYKDGDVTKSTNGTFDVSEGVAVNLNVESNINISNNSRVAGIALSQGSTYNNTYTTESHTWDN NINVSNSTVTTGSNTVLESSGYGHFGNSGEPSDYAGPGDVALSFTDSTSDYAMKNNVYFSNSTLVGDVAFTSTWNANFDP SGHDSNGDGVKDTNAGWVDDSLNVDELNITLDNGSKWVGQATFNAETISPDTMYDVATNSLTPGGTAEANGWNRIIDNKV FQSGVFNVALNNGSEWDTTGRSVVDTLTVNNASQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTE STGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADNNGNVVSGVFDIHSSDYVLNADLVNDRTWDT SKSNYGYGIVAMNSDGHLTINGNGDMNNGDELDNSSVDNVVAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATF SAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNF NGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSH FNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNNMKVDGQSYDSMRYELGV DAGYTFTYSEDQALTPYFKLAYVYDDSNNHNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS ANVGVKYTW >Mature_969_residues MHSWKKKLVVSQLALACTLAITSQANATTYDTWTYVDNAATGLNWTNMDNPGTVDGNYVNYSGFVYYNNTNGDFDQSFNG DTVNGTISTYYLNHDYTDGTNGNANQLDIANSVIHGSITSMLPGGDLWHNNAYDQSYGYIQAGDTVIDTTWYDGDVFTLN IANSTIDDDYEALYFTDYYKDGDVTKSTNGTFDVSEGVAVNLNVESNINISNNSRVAGIALSQGSTYNNTYTTESHTWDN NINVSNSTVTTGSNTVLESSGYGHFGNSGEPSDYAGPGDVALSFTDSTSDYAMKNNVYFSNSTLVGDVAFTSTWNANFDP SGHDSNGDGVKDTNAGWVDDSLNVDELNITLDNGSKWVGQATFNAETISPDTMYDVATNSLTPGGTAEANGWNRIIDNKV FQSGVFNVALNNGSEWDTTGRSVVDTLTVNNASQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTE STGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADNNGNVVSGVFDIHSSDYVLNADLVNDRTWDT SKSNYGYGIVAMNSDGHLTINGNGDMNNGDELDNSSVDNVVAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATF SAANKADLGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNF NGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSH FNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAGYVTPYGSVSGLFQSGDDYQLSNNMKVDGQSYDSMRYELGV DAGYTFTYSEDQALTPYFKLAYVYDDSNNHNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS ANVGVKYTW
Specific function: Unknown
COG id: COG3468
COG function: function code MU; Type V secretory pathway, adhesin AidA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
Organism=Escherichia coli, GI87082145, Length=302, Percent_Identity=25.4966887417219, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR006315 - InterPro: IPR011050 - InterPro: IPR004899 - InterPro: IPR003991 [H]
Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]
EC number: NA
Molecular weight: Translated: 104260; Mature: 104260
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSWKKKLVVSQLALACTLAITSQANATTYDTWTYVDNAATGLNWTNMDNPGTVDGNYVN CCHHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCEEE YSGFVYYNNTNGDFDQSFNGDTVNGTISTYYLNHDYTDGTNGNANQLDIANSVIHGSITS EEEEEEECCCCCCCCCCCCCCEECCEEEEEEEECCCCCCCCCCCCEEEHHHHEECCCHHH MLPGGDLWHNNAYDQSYGYIQAGDTVIDTTWYDGDVFTLNIANSTIDDDYEALYFTDYYK CCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEC DGDVTKSTNGTFDVSEGVAVNLNVESNINISNNSRVAGIALSQGSTYNNTYTTESHTWDN CCCCEECCCCEEEECCCEEEEEEECCCEEECCCCEEEEEEEECCCCCCCEEECCCCCCCC NINVSNSTVTTGSNTVLESSGYGHFGNSGEPSDYAGPGDVALSFTDSTSDYAMKNNVYFS CEECCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEC NSTLVGDVAFTSTWNANFDPSGHDSNGDGVKDTNAGWVDDSLNVDELNITLDNGSKWVGQ CCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEE ATFNAETISPDTMYDVATNSLTPGGTAEANGWNRIIDNKVFQSGVFNVALNNGSEWDTTG EEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCC RSVVDTLTVNNASQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTE CEEEEEEEECCCCEEECCHHHCCCCEEEECCCCEECCCCCCCEECCEEEECCCEEEEEEE STGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADNNGNVVSGVFD CCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCHHCCCEEEEECCCEECCCCCEEEEEEE IHSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDMNNGDELDNSSVDNV ECCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCE VAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATFSAANKADLGAYTYQAEQRGN EEECCCEEEEEECCCCCCCEECCCCCEEEEEEECCCCCEEECCCCCCCCEEEEEHHHCCC TVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNF EEEEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCEE NGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYI CCCCCEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE YSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAG EEECCCCCEEEEECCEEHHHCCCCEEEEECCCEEECCCCCCCCEECCCCCCCEEEECCCC YVTPYGSVSGLFQSGDDYQLSNNMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKL EECCCCCHHHHHCCCCCEEECCCEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEE AYVYDDSNNHNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS EEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC ANVGVKYTW CCCCEEEEC >Mature Secondary Structure MHSWKKKLVVSQLALACTLAITSQANATTYDTWTYVDNAATGLNWTNMDNPGTVDGNYVN CCHHHHHHHHHHHHEEEEEEEECCCCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCEEE YSGFVYYNNTNGDFDQSFNGDTVNGTISTYYLNHDYTDGTNGNANQLDIANSVIHGSITS EEEEEEECCCCCCCCCCCCCCEECCEEEEEEEECCCCCCCCCCCCEEEHHHHEECCCHHH MLPGGDLWHNNAYDQSYGYIQAGDTVIDTTWYDGDVFTLNIANSTIDDDYEALYFTDYYK CCCCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEEC DGDVTKSTNGTFDVSEGVAVNLNVESNINISNNSRVAGIALSQGSTYNNTYTTESHTWDN CCCCEECCCCEEEECCCEEEEEEECCCEEECCCCEEEEEEEECCCCCCCEEECCCCCCCC NINVSNSTVTTGSNTVLESSGYGHFGNSGEPSDYAGPGDVALSFTDSTSDYAMKNNVYFS CEECCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCEEEC NSTLVGDVAFTSTWNANFDPSGHDSNGDGVKDTNAGWVDDSLNVDELNITLDNGSKWVGQ CCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEE ATFNAETISPDTMYDVATNSLTPGGTAEANGWNRIIDNKVFQSGVFNVALNNGSEWDTTG EEECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCC RSVVDTLTVNNASQVNVSESKLTSDTIDLTNGSSLNIGEDGYVDTDHLTINSYSTVALTE CEEEEEEEECCCCEEECCHHHCCCCEEEECCCCEECCCCCCCEECCEEEECCCEEEEEEE STGWGADYNLYANTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADNNGNVVSGVFD CCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCHHCCCEEEEECCCEECCCCCEEEEEEE IHSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDMNNGDELDNSSVDNV ECCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCE VAATGNYKVRIDNATGAGAIADYKDKEIIYVNDVNSNATFSAANKADLGAYTYQAEQRGN EEECCCEEEEEECCCCCCCEECCCCCEEEEEEECCCCCEEECCCCCCCCEEEEEHHHCCC TVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGLADNGGAWVSYFGGNF EEEEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCEECCCCCCCCCCCCEEEEEECCEE NGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGDMNDRSGQVDQDSQTAYI CCCCCEEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE YSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNSDAWGFGLKAGYDFKLGDAG EEECCCCCEEEEECCEEHHHCCCCEEEEECCCEEECCCCCCCCEECCCCCCCEEEECCCC YVTPYGSVSGLFQSGDDYQLSNNMKVDGQSYDSMRYELGVDAGYTFTYSEDQALTPYFKL EECCCCCHHHHHCCCCCEEECCCEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCEEEE AYVYDDSNNHNDVNGDSIDNGTEGSAVRVGLGTQFSFTKNFSAYTDANYLGGGDVDQDWS EEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC ANVGVKYTW CCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]