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The map label for this gene is ybaY

Identifier: 218698635

GI number: 218698635

Start: 252117

End: 252689

Strand: Reverse

Name: ybaY

Synonym: ECIAI39_0220

Alternate gene names: 218698635

Gene position: 252689-252117 (Counterclockwise)

Preceding gene: 218698637

Following gene: 218698633

Centisome position: 4.92

GC content: 53.93

Gene sequence:

>573_bases
ATGAAACTCGTGCACATGGCCAGTGGTTTAGCGGTTGCGATTGCGTTGGCGGCTTGCGCAGATAAAAGCGCGGATATTCA
GACGCCAGCACCGGCTGCAAATACGTCTATTTCAGCAACACAACAACCTGCTATCCAGCAACCGAATGTCTCCGGTACCG
TTTGGATCCGTCAGAAAGTCGCACTGCCGCCTGATGCCGTGCTGACCGTGACACTTTCTGACGCGTCGTTAGCCGATGCA
CCGTCAAAAGTGCTGGCGCAGAAAGCGGTGCGTACCGAAGGTAAACAGTCACCATTCAGCTTTGTTCTGCCATTTAACCC
GGCAGATGTTCAGCCGAATGCGCGTATTCTGTTGAGTGCGGCGATTACCGTGAATGACAAACTGGTATTTATTACCGATA
CCGTTCAGCCGGTGATCAACCAGGGCGGAACTAAAGCTGACCTGACATTGGTGCCGGTGCAGCAAACCGCCGTGCCGGTT
CAGGCCAGCGGTGGCGCAACGACTACCGTACCTTCGACTTCACCAACTCAGGTGAATCCGTCTTCGGCAGTTCCAGCTCC
TACGCAATATTAA

Upstream 100 bases:

>100_bases
TGCGTGATGTGTGCCACACTTGTTGACGTTACTATTTTGTTAACCACTCTTCCAGCGAGGAAAGTTAGCCCGCTGGTGCA
TTGATAATAAGGAGAAGTGA

Downstream 100 bases:

>100_bases
GCGCAGTTAACCCTCTCCGCCCGGAGAGGGTTAGTAGTTCCAGCGATAACGCTGCAAGTCGATTTGCCCGCTTCCCGATA
CCATCACACCTTCTGCCAGT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADA
PSKVLAQKAVRTEGKQSPFSFVLPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPV
QASGGATTTVPSTSPTQVNPSSAVPAPTQY

Sequences:

>Translated_190_residues
MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADA
PSKVLAQKAVRTEGKQSPFSFVLPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPV
QASGGATTTVPSTSPTQVNPSSAVPAPTQY
>Mature_190_residues
MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADA
PSKVLAQKAVRTEGKQSPFSFVLPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPV
QASGGATTTVPSTSPTQVNPSSAVPAPTQY

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786658, Length=190, Percent_Identity=99.4736842105263, Blast_Score=366, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19441; Mature: 19441

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKV
CEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
ALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLPFNPADVQPNARILLSA
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEE
AITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNP
EEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEHHCEEEEECCCCCEEECCCCCCCCCCC
SSAVPAPTQY
CCCCCCCCCC
>Mature Secondary Structure
MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPAIQQPNVSGTVWIRQKV
CEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
ALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFVLPFNPADVQPNARILLSA
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEEEE
AITVNDKLVFITDTVQPVINQGGTKADLTLVPVQQTAVPVQASGGATTTVPSTSPTQVNP
EEEECCEEEEEECCHHHHHHCCCCCCEEEEEEEHHCEEEEECCCCCEEECCCCCCCCCCC
SSAVPAPTQY
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]