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The map label for this gene is yacC

Identifier: 218698542

GI number: 218698542

Start: 146556

End: 147074

Strand: Reverse

Name: yacC

Synonym: ECIAI39_0122

Alternate gene names: 218698542

Gene position: 147074-146556 (Counterclockwise)

Preceding gene: 218698544

Following gene: 218698541

Centisome position: 2.87

GC content: 48.17

Gene sequence:

>519_bases
TTGCATAGTTATTTCCTTATTCTTAAGCAGGCGAAACAAAATCAAACGTTGAGCATAGTCCTTCCCCTTACGGGAAGGTC
AAGCCGCAGACACAATTTAATCGACAATAATGGTCGTCGCCTCGCTCGCAGTGTGCTAACGTTTATCTTCTTTAAGCCCC
TGGTAGAAGCAATGAAGACGTTTTTCAGAACAGTGTTATTCGGCAGCCTGATGGCCGTCTGCGCAAACAGTTACGCGCTC
AGCGAGTCTGAAGCCGAAGATATGGCCGATTTAACGGCAGTTTTTGTCTTTCTGAAGAACGATTGTGGTTACCAGAACTT
ACCTAACGGGCAAATTCGTCGCGCACTGGTCTTTTTTGCCCAGCAAAACCAGTGGGATCTCAGCAACTACGATACCTTCG
ACATGAAAGCCCTCGGTGAAGACAGCTACCGCGATCTCAGCGGCATTGGCATTCCCGTCGCTAAAAAATGCAAAGCCCTG
GCCCGCGATTCCTTAAGCCTGCTTGCCTACGTCAAATAA

Upstream 100 bases:

>100_bases
TCGGTAACGTTGGGCGTTCCGCCGCAAATACTGCGCGGCTCCACAGCGGCAAAGCCGAAGCCACACCCAGCGCGACGGAA
TATTTTAAGAAATCACGACG

Downstream 100 bases:

>100_bases
TCCCTGATACCTTTTTGTAGAAATATTGACCGTGCATCCGCGGTCAATGTTAGCTATTATGTTGCGCCCTTTTTTTACGG
GTGTTAACAAAGGAGGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MHSYFLILKQAKQNQTLSIVLPLTGRSSRRHNLIDNNGRRLARSVLTFIFFKPLVEAMKTFFRTVLFGSLMAVCANSYAL
SESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKAL
ARDSLSLLAYVK

Sequences:

>Translated_172_residues
MHSYFLILKQAKQNQTLSIVLPLTGRSSRRHNLIDNNGRRLARSVLTFIFFKPLVEAMKTFFRTVLFGSLMAVCANSYAL
SESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKAL
ARDSLSLLAYVK
>Mature_172_residues
MHSYFLILKQAKQNQTLSIVLPLTGRSSRRHNLIDNNGRRLARSVLTFIFFKPLVEAMKTFFRTVLFGSLMAVCANSYAL
SESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKAL
ARDSLSLLAYVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081688, Length=115, Percent_Identity=100, Blast_Score=239, Evalue=5e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019114 [H]

Pfam domain/function: PF09691 PulS_OutS [H]

EC number: NA

Molecular weight: Translated: 19447; Mature: 19447

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSYFLILKQAKQNQTLSIVLPLTGRSSRRHNLIDNNGRRLARSVLTFIFFKPLVEAMKT
CCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFA
HHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
QQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
CCCCCCCCCCCCCHHHHCCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHEECC
>Mature Secondary Structure
MHSYFLILKQAKQNQTLSIVLPLTGRSSRRHNLIDNNGRRLARSVLTFIFFKPLVEAMKT
CCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFA
HHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
QQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
CCCCCCCCCCCCCHHHHCCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]