Click here to switch to the map view.

The map label for this gene is yacH

Identifier: 218698537

GI number: 218698537

Start: 139394

End: 141247

Strand: Reverse

Name: yacH

Synonym: ECIAI39_0117

Alternate gene names: 218698537

Gene position: 141247-139394 (Counterclockwise)

Preceding gene: 218698540

Following gene: 218698532

Centisome position: 2.75

GC content: 54.1

Gene sequence:

>1854_bases
ATGAAAATGACTTTGCCGTTTAAACCCCATGTGCTGGCGCTAATTTGCAGTGCCGGGCTTTGTGCCGCCTCTGCCGGGCT
ATATATAAAAAGCCGCACAGTGGAAGCGCCTGTGGAATCGCAATCGACACAACAGACTGCGCCTGACATCTCCGCAGTTA
CGCTTCCTGCAACGGTTTCCGCGCCTCCCGTAACGCCTGCCGTCGTCAAATCTACATTCAGCACTGCACAAATCGATCAA
TGGGTCGCGCCCGTCGCGCTGTACCCCGACTCTCTGCTTTCACAAGTGTTAATGGCATCAACCTATCCGGCAAACGTTGC
TCAAGCAGTGCAATGGTCGCACGATAATCCACTTAAACAAGGCGATGCTGCTATTCAGGCGGTATCTGGCCAGCCGTGGG
ACGCCAGCGTCAAATCACTGGTGGCCTTTCCACAATTGATGGCATTGATGGGCGAAAACCCGCAATGGGTGCAAAACCTG
GGCGATGCTTTTCTGGCGCAGCCGCAGGACGTGATGGACTCGGTACAACGATTGCGGCAACTGGCGCAACAAACCGGTTC
GCTAAAGTCATCAACTGAACAAAAGATCATCACGACAACGAAAAAAGTCGTACCGGTAAATCAGCCCGCCAACGCCCCTG
CTACACAATCAAATACCGTTTCTACGTCCAGCCCCGTCGTCGCAGAACCTGCACCGACCGTAATAACCATTGAGCCAGCC
AATCCGGATGTGGTTTATATTCCGAACTACAACCCAAACGTGGTTTACGGCAGTTGGGCCAATACCGCTTATCCGCCAGT
TTATCTGCCGCCGCCAGCCGGAGAACCGTTTGTTGACAGCTTTGTGCGCGGATTCGGCTATAGCATGGGCGTTGCTACCA
CATACGCACTATTCAGCAGCATCGACTGGGACGACGACGATCATGACCATCATCATCATGACGATGATGATTATCATCAC
CACGATGGCGGTCATCGTGACGGTAATGACTGGCAACACAACGGCGACAACATCAATATCGACGTCAACAATTTCAACCG
TATCACTGGTGAGCATCTTACTGATAAGAATATGGCATGGCGGCACAATCCAAACTACCGTGATGGTGTGCCCTATCATG
ATCAGGATATGGCAAAGCGGTTTCACCAAACCGATGTCAACGGCGGCATGAGCGCCACGCAGTTACCTGCTCTATCGCGC
GACAGTCAGCGTCAGGCAGCAGCAAGTCAGTTTCAGCAACGAACACACGCCGCCCCCGTCATTACACGAGATACCCAACG
TCAGGCAGCGGCACAGCGGTTTAATGAAGCTGAAAACTATGGGAGCTATGACGACTTCCGCGACTTCAGCCGTCGCCAAC
CACTGACCCAGCAACAAAAGGACGCCGCTCGTCAGCGTTATCAGTCGGCCTCTCCTGAGCAGCGCCAGGCAGTCCGCGAG
AAAATGCAGACTAACCCGCAGATCCAGCAGCGAAGAGAGGCAGCGCGTGAGCGTATTCAGTCCGCCTCGCCTGAGCAGCG
CCAGGCGGTTCGCGAGAAAATGCAGACTAACCCGCAGAACCAGCAGCGAAGAGAGGCAGCGCGTGAGCGTATTCAGTCTG
CAACTCCCGAACAGCGCCAGGTGTTTAAGGAAAAAGTACAGCAGCGCCCACTGAACCAACAGCAACGTGATAACGCCCGC
CAGCGTATACAATCGGCATCACCTGAACAACGTCAGGTTTTTCGGGAGAAAGTTCAGGAGAGCCGCCCACAACGTCTAAA
CGACAGTAACCATACTGTCAGGCTGAATAACGAGCAACGGTCAGCAGTACGCGAACGTCTCTCTGAGCGCGGAGCAAGGC
GACTGGAAAGGTAA

Upstream 100 bases:

>100_bases
AGATTAGTCAAAATTTAAACTACGGCCTCTTTATACTCGGATTCACAGCACCTGCGGGTGGCAGTTCGCCGACCATTGCG
ATTTCCTTGAGATCCGAATT

Downstream 100 bases:

>100_bases
ATTACAGACGTAAAAAAAGCGGCGTGGTTAGCCGCTTTTTTAATTGCCAGATGTCCCGGCAAACGAAGAGTTACTTCTTC
TTCGCTTTCGGGTTCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVESQSTQQTAPDISAVTLPATVSAPPVTPAVVKSTFSTAQIDQ
WVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSGQPWDASVKSLVAFPQLMALMGENPQWVQNL
GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA
NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHH
HDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRDGVPYHDQDMAKRFHQTDVNGGMSATQLPALSR
DSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRE
KMQTNPQIQQRREAARERIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQRPLNQQQRDNAR
QRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSERGARRLER

Sequences:

>Translated_617_residues
MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVESQSTQQTAPDISAVTLPATVSAPPVTPAVVKSTFSTAQIDQ
WVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSGQPWDASVKSLVAFPQLMALMGENPQWVQNL
GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA
NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHH
HDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRDGVPYHDQDMAKRFHQTDVNGGMSATQLPALSR
DSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRE
KMQTNPQIQQRREAARERIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQRPLNQQQRDNAR
QRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSERGARRLER
>Mature_617_residues
MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVESQSTQQTAPDISAVTLPATVSAPPVTPAVVKSTFSTAQIDQ
WVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQGDAAIQAVSGQPWDASVKSLVAFPQLMALMGENPQWVQNL
GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA
NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHH
HDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRDGVPYHDQDMAKRFHQTDVNGGMSATQLPALSR
DSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRE
KMQTNPQIQQRREAARERIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQRPLNQQQRDNAR
QRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSERGARRLER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786308, Length=617, Percent_Identity=92.7066450567261, Blast_Score=1124, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021728 [H]

Pfam domain/function: PF11737 DUF3300 [H]

EC number: NA

Molecular weight: Translated: 69344; Mature: 69344

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVESQSTQQTAPDISAVTLPATVS
CCCCCCCCHHHHHHHHHCCHHHHHCCCEEECCCCCCCCCCCCHHHCCCCCCEEEECCCCC
APPVTPAVVKSTFSTAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH
GDAAIQAVSGQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQ
CCHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA
HHHHHCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECC
NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSS
CCCEEEECCCCCCEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
IDWDDDDHDHHHHDDDDYHHHDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCC
RHNPNYRDGVPYHDQDMAKRFHQTDVNGGMSATQLPALSRDSQRQAAASQFQQRTHAAPV
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
ITRDTQRQAAAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRE
EECCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
KMQTNPQIQQRREAARERIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQ
HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHH
VFKEKVQQRPLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQR
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCEEEECCHHH
SAVRERLSERGARRLER
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAPVESQSTQQTAPDISAVTLPATVS
CCCCCCCCHHHHHHHHHCCHHHHHCCCEEECCCCCCCCCCCCHHHCCCCCCEEEECCCCC
APPVTPAVVKSTFSTAQIDQWVAPVALYPDSLLSQVLMASTYPANVAQAVQWSHDNPLKQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH
GDAAIQAVSGQPWDASVKSLVAFPQLMALMGENPQWVQNLGDAFLAQPQDVMDSVQRLRQ
CCHHHEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LAQQTGSLKSSTEQKIITTTKKVVPVNQPANAPATQSNTVSTSSPVVAEPAPTVITIEPA
HHHHHCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECC
NPDVVYIPNYNPNVVYGSWANTAYPPVYLPPPAGEPFVDSFVRGFGYSMGVATTYALFSS
CCCEEEECCCCCCEEEECCCCCCCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
IDWDDDDHDHHHHDDDDYHHHDGGHRDGNDWQHNGDNINIDVNNFNRITGEHLTDKNMAW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCC
RHNPNYRDGVPYHDQDMAKRFHQTDVNGGMSATQLPALSRDSQRQAAASQFQQRTHAAPV
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
ITRDTQRQAAAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRE
EECCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
KMQTNPQIQQRREAARERIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQ
HHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHH
VFKEKVQQRPLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQR
HHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCEEEECCHHH
SAVRERLSERGARRLER
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]