| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218698443
Identifier: 218698443
GI number: 218698443
Start: 27121
End: 28542
Strand: Reverse
Name: 218698443
Synonym: ECIAI39_0024
Alternate gene names: NA
Gene position: 28542-27121 (Counterclockwise)
Preceding gene: 218698444
Following gene: 218698442
Centisome position: 0.56
GC content: 31.5
Gene sequence:
>1422_bases ATGACAGATGGTATCTCAACTTCGCCACATTGTCTTTATAAATCAAATATAGCAGATGATGTAATAATAAATAAAACAAG ACAAAATGAGTTAGTAAAAGTGTTTTGCGAGTATAAAACAGAGTTCTTAATTTTGTTTGATGACTTTTTCAGAAGCCAGC ATTTGCCTAAACCATCTCCAGTCCTTCATCATTTTTTTCAATACACTCATCTAAGAGATGCACATTTTTATAGATGTAAA CTCATAGAACATACAGTTCAATTATCTTTTTTTAAACACAAAGGCATTACATTACTTAGATTGGATGTTTTTGATGACAT AACAAGCGAATGTCTTTCTGAAGAGATTAAGATATATCAAGAATGCTATGAAAAATTCGTTAAGTTTTTAAAGGAAAACT TCAACCAGGAAATATACCCACAGCTATATACTCCTGAAATATTTTATGAGGCCTGCAGAAACCTCCAGTCATTTTATGAT CATCAGGAGACGTCACAAAACGCTAAATACAGTGCAATAGACAAGAAAAAAAGTTATTTTAATAAGGAAATCAAAAGTCT AATTAAAAAGAATATTTATCCTGAGCTATACAATGAACAATGCTTGAAAATCCCCGTCTCATCGACAGATGATAACCAGG AAAAAACATGGCAAAATTTTAAAACTAGCAATGCGGCATATTCACAACTATGTGAAAAATCAGCTTTATTTAAAAGCGTG CCCAGTCGGTTAATAGAAAAGTCAGCTTACTGCTCAACTGAAAACATGGTCACCAATAAATTTGGTGTTGTCTTTTCTTA CTGCGGAGATAATATAAAGGAATTTATACTTTTATTACCCTATAATAAATCACTGGAGATGTATGAACTTAACGAGCAAA AAATCCAGTATTTGATTACCCATAATATTAATATAAATAAACTATTGCTATCAAATATAACAATAGAAAAGAGCAATCTT TCATATGGGTATTATTTTGGTTGTGTATTATCCAATATATCATGTTTTGAAAGCGACTTATCAAACACCATCTTTTCGAA TGGAGAAATAAATAATCTCTTCATTAAAAAAAGCAACATATTTGGAACATCGTTCACTAATACCAGGATAAAAAATTTGC GCTGTGAAGATATTATGCCTGGTCGATGGAACACTCAACTTGTCAATAAGCACTTAGGTTACCGATACACCGGAGTATTC AAAACCCTGGCAAGTATTGATGACAAACCGTCCCGTTTCGAAATTTTGATACCATTGATACAAACTTTAGTTCGTGACAA TGTAAAGCTAAATAATGATGTGTATAAAGAACTTAATAATTTTATGCTCGATTACGACAAAACATCCTCAGAAATGAGAA AATACCTTCAGAGCATCAACGAGTGTATACTCCTTATGAAAAACATAGTTCATCAAGATTAA
Upstream 100 bases:
>100_bases TTTATATTGTACTTCTTAAAATTAATGAGCGATTTTTGATAGTAGTCACATTCACTCATAAATTAAATTAATAAAAATTC ATCAACTTCAAGGACTGATA
Downstream 100 bases:
>100_bases AACACTCCCAAAAGAAGTAATTTCAGAATGAAATTATCTGTGATGATTATTAATTCACTGCAGAGAAACAAAAAATAATC TGAAGCATGATCTTAAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTDGISTSPHCLYKSNIADDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQHLPKPSPVLHHFFQYTHLRDAHFYRCK LIEHTVQLSFFKHKGITLLRLDVFDDITSECLSEEIKIYQECYEKFVKFLKENFNQEIYPQLYTPEIFYEACRNLQSFYD HQETSQNAKYSAIDKKKSYFNKEIKSLIKKNIYPELYNEQCLKIPVSSTDDNQEKTWQNFKTSNAAYSQLCEKSALFKSV PSRLIEKSAYCSTENMVTNKFGVVFSYCGDNIKEFILLLPYNKSLEMYELNEQKIQYLITHNININKLLLSNITIEKSNL SYGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNIFGTSFTNTRIKNLRCEDIMPGRWNTQLVNKHLGYRYTGVF KTLASIDDKPSRFEILIPLIQTLVRDNVKLNNDVYKELNNFMLDYDKTSSEMRKYLQSINECILLMKNIVHQD
Sequences:
>Translated_473_residues MTDGISTSPHCLYKSNIADDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQHLPKPSPVLHHFFQYTHLRDAHFYRCK LIEHTVQLSFFKHKGITLLRLDVFDDITSECLSEEIKIYQECYEKFVKFLKENFNQEIYPQLYTPEIFYEACRNLQSFYD HQETSQNAKYSAIDKKKSYFNKEIKSLIKKNIYPELYNEQCLKIPVSSTDDNQEKTWQNFKTSNAAYSQLCEKSALFKSV PSRLIEKSAYCSTENMVTNKFGVVFSYCGDNIKEFILLLPYNKSLEMYELNEQKIQYLITHNININKLLLSNITIEKSNL SYGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNIFGTSFTNTRIKNLRCEDIMPGRWNTQLVNKHLGYRYTGVF KTLASIDDKPSRFEILIPLIQTLVRDNVKLNNDVYKELNNFMLDYDKTSSEMRKYLQSINECILLMKNIVHQD >Mature_472_residues TDGISTSPHCLYKSNIADDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQHLPKPSPVLHHFFQYTHLRDAHFYRCKL IEHTVQLSFFKHKGITLLRLDVFDDITSECLSEEIKIYQECYEKFVKFLKENFNQEIYPQLYTPEIFYEACRNLQSFYDH QETSQNAKYSAIDKKKSYFNKEIKSLIKKNIYPELYNEQCLKIPVSSTDDNQEKTWQNFKTSNAAYSQLCEKSALFKSVP SRLIEKSAYCSTENMVTNKFGVVFSYCGDNIKEFILLLPYNKSLEMYELNEQKIQYLITHNININKLLLSNITIEKSNLS YGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNIFGTSFTNTRIKNLRCEDIMPGRWNTQLVNKHLGYRYTGVFK TLASIDDKPSRFEILIPLIQTLVRDNVKLNNDVYKELNNFMLDYDKTSSEMRKYLQSINECILLMKNIVHQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55730; Mature: 55599
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGISTSPHCLYKSNIADDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQHLPKPSP CCCCCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCH VLHHFFQYTHLRDAHFYRCKLIEHTVQLSFFKHKGITLLRLDVFDDITSECLSEEIKIYQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHHHHHHH ECYEKFVKFLKENFNQEIYPQLYTPEIFYEACRNLQSFYDHQETSQNAKYSAIDKKKSYF HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NKEIKSLIKKNIYPELYNEQCLKIPVSSTDDNQEKTWQNFKTSNAAYSQLCEKSALFKSV HHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH PSRLIEKSAYCSTENMVTNKFGVVFSYCGDNIKEFILLLPYNKSLEMYELNEQKIQYLIT HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCCEEEECCHHHEEEEEE HNININKLLLSNITIEKSNLSYGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNI CCCCCHHEEHCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCC FGTSFTNTRIKNLRCEDIMPGRWNTQLVNKHLGYRYTGVFKTLASIDDKPSRFEILIPLI CCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH QTLVRDNVKLNNDVYKELNNFMLDYDKTSSEMRKYLQSINECILLMKNIVHQD HHHHHCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDGISTSPHCLYKSNIADDVIINKTRQNELVKVFCEYKTEFLILFDDFFRSQHLPKPSP CCCCCCCCCEEEECCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCH VLHHFFQYTHLRDAHFYRCKLIEHTVQLSFFKHKGITLLRLDVFDDITSECLSEEIKIYQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHHHHHHH ECYEKFVKFLKENFNQEIYPQLYTPEIFYEACRNLQSFYDHQETSQNAKYSAIDKKKSYF HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NKEIKSLIKKNIYPELYNEQCLKIPVSSTDDNQEKTWQNFKTSNAAYSQLCEKSALFKSV HHHHHHHHHHCCCHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH PSRLIEKSAYCSTENMVTNKFGVVFSYCGDNIKEFILLLPYNKSLEMYELNEQKIQYLIT HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHEEEEECCCCCCEEEECCHHHEEEEEE HNININKLLLSNITIEKSNLSYGYYFGCVLSNISCFESDLSNTIFSNGEINNLFIKKSNI CCCCCHHEEHCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEECCC FGTSFTNTRIKNLRCEDIMPGRWNTQLVNKHLGYRYTGVFKTLASIDDKPSRFEILIPLI CCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHH QTLVRDNVKLNNDVYKELNNFMLDYDKTSSEMRKYLQSINECILLMKNIVHQD HHHHHCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA