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The map label for this gene is yehB [H]

Identifier: 218698440

GI number: 218698440

Start: 23091

End: 25541

Strand: Reverse

Name: yehB [H]

Synonym: ECIAI39_0021

Alternate gene names: 218698440

Gene position: 25541-23091 (Counterclockwise)

Preceding gene: 218698441

Following gene: 218698439

Centisome position: 0.5

GC content: 41.25

Gene sequence:

>2451_bases
ATGTTAAGGACGACACGATGGGTCGCTGCTATTATTTTTTTGTATTCTTTTCCGGGTTATGCTGAAGAAACTTTTGATAC
GCACTTCATGATTGGCGGCATGAGAGGAGAAAAAGTTTCCGAATATCGTTTCGATAATAAACAACCGCTTCCAGGAAACT
ACGAACTTGATTTTTATGTAAATCACCAGTGGCGTGGGAAAAAAGATATCACGATCCCAGAGTCACCAGCCAAACCATGT
CTGCCTAAGGTGCTGCTAACCACACTGGGGGTAAAGACCGATAACCTCAATACAGAAGATAATTGTATTTTACTGGATGA
AGCGGTTCATGGTGGACAATATCAGTGGGATATCAGTGAACACCGACTAAATTTAACAGTACCACAGGCGTATATCAATG
AACTTGAAAGAGGCTACGTTCCCCCAGAAAGTTGGGATCGCGGCATTGATGTTTTTTATACCTCCTATAATTTAAGTCAG
TATCGCTCTTATGACAGCAATAATAACAGTAATACAGCCAGTTATGGCCGGTTTAACAGCGGATTAAATTTATTTAGTTG
GCAGTTACACTCTGATGCCAGTTATAGCAAACCTGATGATATGAAAGGCAAATGGCAAAGTAATACTCTTTACCTGGAAC
GTGGCTGGTCGCAAATATTAAGCACAGTTCAGATAGGAGAAAATTACACATCCTCACTCATATTCGACTCTCTGCGATTT
AGCGGAATACGCTTATTTCGCGATATGCAAATGCTACCTGATTCTATGCAAAGCTTTACACCTTTAGTACAAGGTGTTGC
GCAAAGTAACGCCTTGATAACGGTTTCGCAAAATGGCTATACCATTTACCAAAAAGAGGTTCCCCCAGGACCATTTACTA
TCGCAGATTTGCAACTTTCGGGCAGCGGCTCTGATCTCGATGTCAGCATTAAGGAAGCAGATGGTAGTGTTCGTTCCTTT
TTGGTTCCCTACTCTTCCGTGCCCAATATGCTGCAACCTGGTGTTTCAAATTTCGATTTTATCGCCGGACGCAGTCAGAT
ATATGGTGTCAAGAATCAGGAGGACTTTCTCGAGGCAAATTATATATATGGCCTCAACAATCTTTTGACACTTTATGGCG
GTACGATTTTATCCGATAACTATAATGCTATAACTCTGGGAAATGGTTGGAATACACCGCTGGGAGCAATCTCTTTTGAT
GCTACCCGATCGAGTAGTAAGTTAAATAATGATACCAGACACGAAGGTACGAGCTATCAGGTCGCCTATAATAAATATCT
ATTGCAAACGGCTACTCACTTTAGCGTGGCCGCCTGGCGTTATGCTTCGCAGGATTACAGGACATTCAGCGACCATCTTT
ACGAAAATGATAAAATAAATCATCAGAGTGACTATGACGATTTTTATGATATTGGCAGAAAAAATAGCCTTTCTGCCAAT
ATCATGCAACCTTTATCCAATAATCTGGGAAATGTATCATTAAGTGCGCTTTGGCGGAATTACTGGGGGCGAAGTGGAAA
TGCTAAAGATTACCAATTCAGTTATTCCAATAGCTGGCAACGCATCAGTTATACTTTCTCTGCCAGCCAATCCTATGATG
AAAACGACAAAGAAGAGGAGCGTTTTAATCTGTTTATCTCCATTCCTTTCCACTGGGGGGATGATATTGCCAAAACACGT
CACCAAATTAACTTATCGAATTCGACCTCATTTTCCAAAGATGGCTATTCCTCCAACAATACTGGAATTACTGGCATAGC
CGGTGAACATGATCAGTTAAATTATGGTATATATGTTAATCAGCAACAACAAAATAATGATACCTCGCTTGGTACGAATT
TAAGCTGGAGAACTCCCATCGCCACAATAGATGGCAGCTATAGCCATTCTAAAAACGCCTGGCAAAGTGGTGGAAGTATT
AGTAGTGGATTAGTTGTCTGGCCCGGTGGTATTAATATAACTAACCAGTTATGCGATACATTTGCAATTCTGGATGCGCC
TGGGTTAGAAGGCGCGCATATTAATGGACAAAAATACAACCGAACAAACAGCAAAGGCCAGGTTGTTTACGACCTGATGA
TACCTCATCGTGAAAACCATCTGGTACTTGATATAGCAAACAGTGAAAGTGAAACAGAATTGCAGGGCAATCGTCAAATT
ATTGCGCCTTACCGTGGAGCAGTTTCTTATGTGCAGTTTACAACTGACCAACGTAAGCCCTGGTATATACAGGCACTGCG
TCCCGATGGTTCGCCATTAACCTTTGGCTATGACGTACTGGATCTCCAGGAAAACAATATTGGAGTCGTTGGCCAGGGTA
GTCGCCTTTTTATTCGCGTAGATGAAATTCCCACTGGCATAAAAGTTGCTCTCAATGATGAACAGAACTTATTCTGTACT
ATTACTTTTCAACACGTTATCGATGAAAACAAAACATATATATGCCAGTAA

Upstream 100 bases:

>100_bases
ATTAAAAAATAACCACGCATCAGAATATGAACTAACGGTAGTTGATGATTACGGGAATAACATCCATAGTAACATCGCCG
CAAGATAACAGGAAAAAGTC

Downstream 100 bases:

>100_bases
AAGGAGTTTACTATGAAGTGGCTTTTATTAATCACCTTGAGTCTATATTCTTTTATTGTGCAAAGTGCTCCCTGTGCAGT
GACCAATGTCGGTGAACAAC

Product: putative fimbrial biogenesis outer membrane usher protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDFYVNHQWRGKKDITIPESPAKPC
LPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISEHRLNLTVPQAYINELERGYVPPESWDRGIDVFYTSYNLSQ
YRSYDSNNNSNTASYGRFNSGLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLSGSGSDLDVSIKEADGSVRSF
LVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEANYIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFD
ATRSSSKLNNDTRHEGTSYQVAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDYDDFYDIGRKNSLSAN
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEERFNLFISIPFHWGDDIAKTR
HQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVNQQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSI
SSGLVVWPGGINITNQLCDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQNLFCT
ITFQHVIDENKTYICQ

Sequences:

>Translated_816_residues
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDFYVNHQWRGKKDITIPESPAKPC
LPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISEHRLNLTVPQAYINELERGYVPPESWDRGIDVFYTSYNLSQ
YRSYDSNNNSNTASYGRFNSGLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLSGSGSDLDVSIKEADGSVRSF
LVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEANYIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFD
ATRSSSKLNNDTRHEGTSYQVAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDYDDFYDIGRKNSLSAN
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEERFNLFISIPFHWGDDIAKTR
HQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVNQQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSI
SSGLVVWPGGINITNQLCDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQNLFCT
ITFQHVIDENKTYICQ
>Mature_816_residues
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDFYVNHQWRGKKDITIPESPAKPC
LPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISEHRLNLTVPQAYINELERGYVPPESWDRGIDVFYTSYNLSQ
YRSYDSNNNSNTASYGRFNSGLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLSGSGSDLDVSIKEADGSVRSF
LVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEANYIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFD
ATRSSSKLNNDTRHEGTSYQVAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDYDDFYDIGRKNSLSAN
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEERFNLFISIPFHWGDDIAKTR
HQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVNQQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSI
SSGLVVWPGGINITNQLCDTFAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRVDEIPTGIKVALNDEQNLFCT
ITFQHVIDENKTYICQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1788427, Length=826, Percent_Identity=58.4745762711864, Blast_Score=1040, Evalue=0.0,
Organism=Escherichia coli, GI1786332, Length=845, Percent_Identity=32.7810650887574, Blast_Score=408, Evalue=1e-115,
Organism=Escherichia coli, GI1790772, Length=851, Percent_Identity=30.3172737955347, Blast_Score=379, Evalue=1e-106,
Organism=Escherichia coli, GI1787172, Length=837, Percent_Identity=28.673835125448, Blast_Score=322, Evalue=8e-89,
Organism=Escherichia coli, GI1786744, Length=838, Percent_Identity=29.9522673031026, Blast_Score=321, Evalue=1e-88,
Organism=Escherichia coli, GI1789533, Length=815, Percent_Identity=27.7300613496933, Blast_Score=303, Evalue=3e-83,
Organism=Escherichia coli, GI87081778, Length=525, Percent_Identity=30.8571428571429, Blast_Score=220, Evalue=3e-58,
Organism=Escherichia coli, GI1789610, Length=855, Percent_Identity=22.4561403508772, Blast_Score=106, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92209; Mature: 92209

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDFYV
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCEEEEEEE
NHQWRGKKDITIPESPAKPCLPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHH
HRLNLTVPQAYINELERGYVPPESWDRGIDVFYTSYNLSQYRSYDSNNNSNTASYGRFNS
CEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCCCC
GLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHH
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCEEEEEEEEC
GSGSDLDVSIKEADGSVRSFLVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEAN
CCCCCEEEEEECCCCCEEEEECCCCCCCHHHCCCCCCCEEECCCCCEEECCCHHHHEEEE
YIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFDATRSSSKLNNDTRHEGTSYQ
EEECHHHHHHHHCCEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE
VAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDYDDFYDIGRKNSLSAN
EEEHEEEEHHHCHHEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCHH
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEE
HHHHHHCCCCCEEHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCC
RFNLFISIPFHWGDDIAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVN
EEEEEEEEECCCCCHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEE
QQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSISSGLVVWPGGINITNQLCDT
CCCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHCCCCCCCCEEEECCCCCHHHHHHHH
FAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
EEEEECCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEE
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRV
EEECCCCEEEEEEECCCCCCEEEEEECCCCCEEEECEEEEEECCCCEEEEECCCEEEEEE
DEIPTGIKVALNDEQNLFCTITFQHVIDENKTYICQ
CCCCCCEEEEECCCCCEEEEEEEHHHHCCCCEEEEC
>Mature Secondary Structure
MLRTTRWVAAIIFLYSFPGYAEETFDTHFMIGGMRGEKVSEYRFDNKQPLPGNYELDFYV
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCEEEEEEE
NHQWRGKKDITIPESPAKPCLPKVLLTTLGVKTDNLNTEDNCILLDEAVHGGQYQWDISE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEHHH
HRLNLTVPQAYINELERGYVPPESWDRGIDVFYTSYNLSQYRSYDSNNNSNTASYGRFNS
CEEEEEECHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCCCCC
GLNLFSWQLHSDASYSKPDDMKGKWQSNTLYLERGWSQILSTVQIGENYTSSLIFDSLRF
CCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHH
SGIRLFRDMQMLPDSMQSFTPLVQGVAQSNALITVSQNGYTIYQKEVPPGPFTIADLQLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCEEEEEEEEC
GSGSDLDVSIKEADGSVRSFLVPYSSVPNMLQPGVSNFDFIAGRSQIYGVKNQEDFLEAN
CCCCCEEEEEECCCCCEEEEECCCCCCCHHHCCCCCCCEEECCCCCEEECCCHHHHEEEE
YIYGLNNLLTLYGGTILSDNYNAITLGNGWNTPLGAISFDATRSSSKLNNDTRHEGTSYQ
EEECHHHHHHHHCCEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE
VAYNKYLLQTATHFSVAAWRYASQDYRTFSDHLYENDKINHQSDYDDFYDIGRKNSLSAN
EEEHEEEEHHHCHHEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCHH
IMQPLSNNLGNVSLSALWRNYWGRSGNAKDYQFSYSNSWQRISYTFSASQSYDENDKEEE
HHHHHHCCCCCEEHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCC
RFNLFISIPFHWGDDIAKTRHQINLSNSTSFSKDGYSSNNTGITGIAGEHDQLNYGIYVN
EEEEEEEEECCCCCHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEE
QQQQNNDTSLGTNLSWRTPIATIDGSYSHSKNAWQSGGSISSGLVVWPGGINITNQLCDT
CCCCCCCCCCCCCCEECCCEEEECCCCCCCCCHHHCCCCCCCCEEEECCCCCHHHHHHHH
FAILDAPGLEGAHINGQKYNRTNSKGQVVYDLMIPHRENHLVLDIANSESETELQGNRQI
EEEEECCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEE
IAPYRGAVSYVQFTTDQRKPWYIQALRPDGSPLTFGYDVLDLQENNIGVVGQGSRLFIRV
EEECCCCEEEEEEECCCCCCEEEEEECCCCCEEEECEEEEEECCCCEEEEECCCEEEEEE
DEIPTGIKVALNDEQNLFCTITFQHVIDENKTYICQ
CCCCCCEEEEECCCCCEEEEEEEHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]