| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218698031
Identifier: 218698031
GI number: 218698031
Start: 4962836
End: 4963921
Strand: Reverse
Name: 218698031
Synonym: EC55989_4841
Alternate gene names: NA
Gene position: 4963921-4962836 (Counterclockwise)
Preceding gene: 218698032
Following gene: 218698030
Centisome position: 96.3
GC content: 46.22
Gene sequence:
>1086_bases ATGGCTAGTGTTGATGCAGACTACTGCTACTCGTTTCCGGCTATACGTGGCATTCAGGCAGGCCGCCCCTTCTACATTGC CACATGTCCGATGCGTATCATCCCCAAAATTTTTAGCTTTGATGAAAATGATGTTCCTCCGGAGTTGCGCGCGCAACGCA CCCTCAATAAATCTCGCATCCCTGAAATGGTTCGTTATCTTCTTGAAAATCCTAAAGATTATGTATTTTCTGCACTAACA GCATCCATTGCCGTTGACGTCCAGTTTGATGAGTTTCCCGGCACGAATAATCTAGGGACGTTATGTGTACCAATGGACGC GCAAATCTTGATCAACGACGGTCAGCATCGTCGTAAAGCGATTGAAGACGCTTTAGACGCTCGCCCGGAGCTGGGGCAGG ATAACATACCTGTGCTGTTTTTTGTCGATGAAGGATTAAAACGCAGCCAACAGATGTTTGCCGATCTGAATAAATATGCT ATTCGCCCCAGTCCGTCGTTGGCATCGTTGTATGATCATCGGGATGCCAGTTCAAATTTGGCGCGTTATCTGGCAATGTC CGTAGAGCCGTTTGTCGGAATGACTGAGCTGGAAAAATCCAATATCAGTCAGCGGTCAAATAAATTATTTACGTTAAGCA GCATCAAGCAAGCTACCCGTGCGTTGCTGGGAAAAGATCCGAAAAAGAGCGATTTTGAAGAATGTACCCAGATAGCAACT CGCTATTGGCAAGCTATTTATAATGTAATGCCGGACTGGCAATTAGCCGCAAAAAAGGAAGTTTCACCGGTTCAACTACG TCAGGACTATGTTCACGCTCACGGTATTGGTTTGCAGGCACTCGGACAACTAGGGTATACACTGCTGACAAATTACCCAG AGCAGTGGCCTGATAAAATTGCTGCACTCAAAGTGTTTAACTGGCGCAGAAATAATCCGGATCTTATCAAACGTGCGATG CAGCATGGAAAGTTGAGCAAAACCAGTACGGCAATCCAACTCACCTGCAATGCGCTAAAAAACGCACTCTCAATTCCGCT TACTCCTGAAGAACAGGAGCTTGAAGCCCAAATGGTTGTCTCATGA
Upstream 100 bases:
>100_bases AGATAGTACACAATTCATTACGTAAAATGCTGTAATTTCTATCTAGGGTTACGTAAAATATCACGTAACTTAATTCATTA AATATTTTACGGATTACAGC
Downstream 100 bases:
>100_bases GTAAATTAGTTCAGGCCTACGATTTGGCCGAATACACAGATTTTATTAATCAGGAGCAGTTTTCTGGACGCCCTCTGGCC GAATATATTTCTGAAGTTCA
Product: putative DNA thiolation protein; putative phage protein
Products: NA
Alternate protein names: DGQHR Domain Protein; Bacteriophage Protein; Thiol Protease Domain-Containing Protein; DNA Thiolation Protein; DGQHR Domain-Containing Protein
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MASVDADYCYSFPAIRGIQAGRPFYIATCPMRIIPKIFSFDENDVPPELRAQRTLNKSRIPEMVRYLLENPKDYVFSALT ASIAVDVQFDEFPGTNNLGTLCVPMDAQILINDGQHRRKAIEDALDARPELGQDNIPVLFFVDEGLKRSQQMFADLNKYA IRPSPSLASLYDHRDASSNLARYLAMSVEPFVGMTELEKSNISQRSNKLFTLSSIKQATRALLGKDPKKSDFEECTQIAT RYWQAIYNVMPDWQLAAKKEVSPVQLRQDYVHAHGIGLQALGQLGYTLLTNYPEQWPDKIAALKVFNWRRNNPDLIKRAM QHGKLSKTSTAIQLTCNALKNALSIPLTPEEQELEAQMVVS
Sequences:
>Translated_361_residues MASVDADYCYSFPAIRGIQAGRPFYIATCPMRIIPKIFSFDENDVPPELRAQRTLNKSRIPEMVRYLLENPKDYVFSALT ASIAVDVQFDEFPGTNNLGTLCVPMDAQILINDGQHRRKAIEDALDARPELGQDNIPVLFFVDEGLKRSQQMFADLNKYA IRPSPSLASLYDHRDASSNLARYLAMSVEPFVGMTELEKSNISQRSNKLFTLSSIKQATRALLGKDPKKSDFEECTQIAT RYWQAIYNVMPDWQLAAKKEVSPVQLRQDYVHAHGIGLQALGQLGYTLLTNYPEQWPDKIAALKVFNWRRNNPDLIKRAM QHGKLSKTSTAIQLTCNALKNALSIPLTPEEQELEAQMVVS >Mature_360_residues ASVDADYCYSFPAIRGIQAGRPFYIATCPMRIIPKIFSFDENDVPPELRAQRTLNKSRIPEMVRYLLENPKDYVFSALTA SIAVDVQFDEFPGTNNLGTLCVPMDAQILINDGQHRRKAIEDALDARPELGQDNIPVLFFVDEGLKRSQQMFADLNKYAI RPSPSLASLYDHRDASSNLARYLAMSVEPFVGMTELEKSNISQRSNKLFTLSSIKQATRALLGKDPKKSDFEECTQIATR YWQAIYNVMPDWQLAAKKEVSPVQLRQDYVHAHGIGLQALGQLGYTLLTNYPEQWPDKIAALKVFNWRRNNPDLIKRAMQ HGKLSKTSTAIQLTCNALKNALSIPLTPEEQELEAQMVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40777; Mature: 40646
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVDADYCYSFPAIRGIQAGRPFYIATCPMRIIPKIFSFDENDVPPELRAQRTLNKSRI CCCCCCHHHHCCHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHCHHHH PEMVRYLLENPKDYVFSALTASIAVDVQFDEFPGTNNLGTLCVPMDAQILINDGQHRRKA HHHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEECCCCEEEECCCHHHHHH IEDALDARPELGQDNIPVLFFVDEGLKRSQQMFADLNKYAIRPSPSLASLYDHRDASSNL HHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHH ARYLAMSVEPFVGMTELEKSNISQRSNKLFTLSSIKQATRALLGKDPKKSDFEECTQIAT HHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RYWQAIYNVMPDWQLAAKKEVSPVQLRQDYVHAHGIGLQALGQLGYTLLTNYPEQWPDKI HHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH AALKVFNWRRNNPDLIKRAMQHGKLSKTSTAIQLTCNALKNALSIPLTPEEQELEAQMVV HHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHCCCCCCCHHHHHHHHCC S C >Mature Secondary Structure ASVDADYCYSFPAIRGIQAGRPFYIATCPMRIIPKIFSFDENDVPPELRAQRTLNKSRI CCCCCHHHHCCHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHCHHHH PEMVRYLLENPKDYVFSALTASIAVDVQFDEFPGTNNLGTLCVPMDAQILINDGQHRRKA HHHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCCCCCEEEECCCCEEEECCCHHHHHH IEDALDARPELGQDNIPVLFFVDEGLKRSQQMFADLNKYAIRPSPSLASLYDHRDASSNL HHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHH ARYLAMSVEPFVGMTELEKSNISQRSNKLFTLSSIKQATRALLGKDPKKSDFEECTQIAT HHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RYWQAIYNVMPDWQLAAKKEVSPVQLRQDYVHAHGIGLQALGQLGYTLLTNYPEQWPDKI HHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH AALKVFNWRRNNPDLIKRAMQHGKLSKTSTAIQLTCNALKNALSIPLTPEEQELEAQMVV HHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHCCCCCCCHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA