BacMap

Definition	Escherichia coli 55989, complete genome.
Accession	NC_011748
Length	5,154,862

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The map label for this gene is yjgI

Identifier: 218697999

GI number: 218697999

Start: 4921490

End: 4922203

Strand: Reverse

Name: yjgI

Synonym: EC55989_4807

Alternate gene names: 218697999

Gene position: 4922203-4921490 (Counterclockwise)

Preceding gene: 218698002

Following gene: 218697998

Centisome position: 95.49

GC content: 54.2

Gene sequence:

>714_bases
ATGGGCGCTTTTACAGGTAAGACAGTTCTCATCCTCGGTGGCAGTCGTGGTATCGGTGCCGCTATCGTACGTCGTTTCGT
CACCGATGGGGCCAATGTACGATTCACCTATGCGGGGTCGAAAGATGCCGCTAAACGCCTGGCACAAGAGACTGGAGCGA
CAGCAGTATTCACAGATAGTGCTGACAGAGACGCTGTCATTGATGTCGTTCGTAAGAGCGGCGCATTGGATATCCTGGTG
GTAAATGCAGGTATTGGCGTCTTTGGCGAGGCCCTGGAATTGAATGCCGATGATATTGATCGCCTTTTCAAAATCAATAT
TCATGCTCCTTATCATGCCTCTGTTGAAGCCGCCCGGCAGATGCCCGAAGGCGGGCGCATCTTAATCATCGGCTCCGTGA
ATGGCGATCGTATGCCTGTTGCAGGCATGGCTGCTTATGCCGCCAGTAAATCTGCCCTGCAAGGCATGGCGCGCGGGCTG
GCCCGTGATTTCGGACCGCGTGGGATCACCATTAACGTCGTCCAGCCAGGGCCAATTGATACCGACGCTAATCCCGCCAA
CGGGCCAATGCGCGATATGTTGCATAGTTTTATGGCTATCAAAAGACATGGGCAACCGGAAGAGGTCGCTGGTATGGTCG
CATGGTTAGCAGGGCCAGAAGCCAGTTTTGTTACCGGCGCGATGCATACCATTGATGGCGCGTTTGGCGCATAA

Upstream 100 bases:

>100_bases
TGGAACGCGAGATTGTTTTTTAGTGACCATTACAAAACCTGTTGACAGAAAGTTAAAACAGTTTTGTAATGCATGTTACA
TAATAAATCAAGGAGTCCTT

Downstream 100 bases:

>100_bases
CCGACTACGCTCAATTAAGCCCAGCCATTTCCCATGATGTCTGGGTTTTGTTTACTCACGTCGTCCGCTAAAAGCGGCTC
CTGGTAAATATAAATCTTCT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILV
VNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
ARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA

Sequences:

>Translated_237_residues
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILV
VNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
ARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>Mature_236_residues
GAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDSADRDAVIDVVRKSGALDILVV
NAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLA
RDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=28.6885245901639, Blast_Score=103, Evalue=9e-23,
Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=26.5560165975104, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI126723750, Length=240, Percent_Identity=27.5, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=26.2886597938144, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI7705925, Length=241, Percent_Identity=25.3112033195021, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=28.4153005464481, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=28.3898305084746, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI66933014, Length=245, Percent_Identity=26.1224489795918, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=25.7936507936508, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI223718074, Length=215, Percent_Identity=29.7674418604651, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=27.0916334661355, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI4503817, Length=195, Percent_Identity=29.2307692307692, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=30.952380952381, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI2367365, Length=237, Percent_Identity=99.57805907173, Blast_Score=471, Evalue=1e-134,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=33.8582677165354, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1787335, Length=239, Percent_Identity=35.9832635983264, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=31.7073170731707, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1788459, Length=249, Percent_Identity=27.3092369477912, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=32.5102880658436, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=26.5060240963855, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=31.9502074688797, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786812, Length=247, Percent_Identity=29.9595141700405, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=26.9387755102041, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1789208, Length=176, Percent_Identity=28.9772727272727, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786701, Length=189, Percent_Identity=30.6878306878307, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=30.3149606299213, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=29.0322580645161, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=29.3877551020408, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=29.1497975708502, Blast_Score=80, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=192, Percent_Identity=29.6875, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=262, Percent_Identity=28.2442748091603, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=250, Percent_Identity=28.8, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=27.9693486590038, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=250, Percent_Identity=28, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=192, Percent_Identity=27.6041666666667, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25147288, Length=241, Percent_Identity=26.9709543568465, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=27.9693486590038, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=26.530612244898, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=27.5862068965517, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=254, Percent_Identity=28.740157480315, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=27.0676691729323, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=26.2357414448669, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=270, Percent_Identity=25.1851851851852, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=266, Percent_Identity=28.1954887218045, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24644339, Length=247, Percent_Identity=33.1983805668016, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=30.5785123966942, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI23397609, Length=243, Percent_Identity=30.8641975308642, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=30.9236947791165, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24643142, Length=241, Percent_Identity=28.2157676348548, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=30.0395256916996, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=29.2, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24644337, Length=171, Percent_Identity=32.7485380116959, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24641232, Length=221, Percent_Identity=29.8642533936652, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17737361, Length=255, Percent_Identity=28.2352941176471, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24632; Mature: 24501

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDS
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCEEEEECC
ADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQ
CCCHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCHHHCCEEEEEEECCCCCCHHHHHHC
MPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPID
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAKRLAQETGATAVFTDS
CCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCEEEEECC
ADRDAVIDVVRKSGALDILVVNAGIGVFGEALELNADDIDRLFKINIHAPYHASVEAARQ
CCCHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCHHHCCEEEEEEECCCCCCHHHHHHC
MPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPID
CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TDANPANGPMRDMLHSFMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]