| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218697879
Identifier: 218697879
GI number: 218697879
Start: 4795739
End: 4796488
Strand: Reverse
Name: 218697879
Synonym: EC55989_4681
Alternate gene names: NA
Gene position: 4796488-4795739 (Counterclockwise)
Preceding gene: 218697880
Following gene: 218697878
Centisome position: 93.05
GC content: 43.47
Gene sequence:
>750_bases ATGTTGGTCTCAACGCCGAAATTCGCGATAATCTTCGCTTCGGTCTTGAGTTTGAGAAATCGGCATTTGGTAAATACAAC GTGGATAACGCGATCAACGCCAACTTCCGTTACTCTTTCTGATAACAGCCCGGGCCGCGTTTGCGGCCCTTCTTCTACCG GAGAGAATATGTATTACCCTGTGACAGACTATATCGCTCTTGCTCTCATTATTAGCTTTCTTTTTCTGACATTATTTATC TGCCTGTTATGCCTTAAACATGAGCGAATAAAAAAAGAAACTATCAGGCAAAAAAATGCACATATTCTGGAGCATGGCTG GAATGCAACTGAGTTCTCATGGTTCCGATACGGACAGTATAACGAAACGGGTATTTACATCTCGATCGAGAAGACCATTA TCATTACAATCACCGTTTCTGGTGGGTGCTTTAAAAAAGAATACAGCATTGTCTCCCACATGCTGGTCACTGACACCATA ACAGAGGCCACCCTGTACGAAAACGGGCTGTATACGCGCCACATCAGACTCAGTCGCCCAGTATCTGACAGCAAATACCC CTTGCCACCCGGATCTCAGCTCATTAAAAATATGACCTTACGACTGCGCCTGCAGGATCAGCAGGAAGAAACATCCGTGA CATTATTTCAGGGAAAAATGAGTACCGACGGAAATAACTATTACATCATCAAAGGTAAAGTAAGCTCAGTACTTCTGTTA TTAAAAATGCTGCAGATTAATCACGCCTGA
Upstream 100 bases:
>100_bases GGCTACCAGTTTGACCTGTTTGCCAACGGTGAAACCGTACTGCGTGATGCGTCCGGTGAGAAACGTATCAAAGGTGAAAA AGACGGTCGTATTCTCATGA
Downstream 100 bases:
>100_bases TCTCTGTCCCGGTATTTTAGCCCGAGGTATATTCTGAAATATCATTCATCATGACCGGCGTTTGTATAAACGCCGGTCAT TCGCTAACAGCTTCACCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLVSTPKFAIIFASVLSLRNRHLVNTTWITRSTPTSVTLSDNSPGRVCGPSSTGENMYYPVTDYIALALIISFLFLTLFI CLLCLKHERIKKETIRQKNAHILEHGWNATEFSWFRYGQYNETGIYISIEKTIIITITVSGGCFKKEYSIVSHMLVTDTI TEATLYENGLYTRHIRLSRPVSDSKYPLPPGSQLIKNMTLRLRLQDQQEETSVTLFQGKMSTDGNNYYIIKGKVSSVLLL LKMLQINHA
Sequences:
>Translated_249_residues MLVSTPKFAIIFASVLSLRNRHLVNTTWITRSTPTSVTLSDNSPGRVCGPSSTGENMYYPVTDYIALALIISFLFLTLFI CLLCLKHERIKKETIRQKNAHILEHGWNATEFSWFRYGQYNETGIYISIEKTIIITITVSGGCFKKEYSIVSHMLVTDTI TEATLYENGLYTRHIRLSRPVSDSKYPLPPGSQLIKNMTLRLRLQDQQEETSVTLFQGKMSTDGNNYYIIKGKVSSVLLL LKMLQINHA >Mature_249_residues MLVSTPKFAIIFASVLSLRNRHLVNTTWITRSTPTSVTLSDNSPGRVCGPSSTGENMYYPVTDYIALALIISFLFLTLFI CLLCLKHERIKKETIRQKNAHILEHGWNATEFSWFRYGQYNETGIYISIEKTIIITITVSGGCFKKEYSIVSHMLVTDTI TEATLYENGLYTRHIRLSRPVSDSKYPLPPGSQLIKNMTLRLRLQDQQEETSVTLFQGKMSTDGNNYYIIKGKVSSVLLL LKMLQINHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28323; Mature: 28323
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSTPKFAIIFASVLSLRNRHLVNTTWITRSTPTSVTLSDNSPGRVCGPSSTGENMYYP CCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCCCCEECCCCCCCCEEEC VTDYIALALIISFLFLTLFICLLCLKHERIKKETIRQKNAHILEHGWNATEFSWFRYGQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCC NETGIYISIEKTIIITITVSGGCFKKEYSIVSHMLVTDTITEATLYENGLYTRHIRLSRP CCCEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC VSDSKYPLPPGSQLIKNMTLRLRLQDQQEETSVTLFQGKMSTDGNNYYIIKGKVSSVLLL CCCCCCCCCCHHHHHHCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCHHHHHHH LKMLQINHA HHHHHHCCC >Mature Secondary Structure MLVSTPKFAIIFASVLSLRNRHLVNTTWITRSTPTSVTLSDNSPGRVCGPSSTGENMYYP CCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEECCCCCCCEECCCCCCCCEEEC VTDYIALALIISFLFLTLFICLLCLKHERIKKETIRQKNAHILEHGWNATEFSWFRYGQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCC NETGIYISIEKTIIITITVSGGCFKKEYSIVSHMLVTDTITEATLYENGLYTRHIRLSRP CCCEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC VSDSKYPLPPGSQLIKNMTLRLRLQDQQEETSVTLFQGKMSTDGNNYYIIKGKVSSVLLL CCCCCCCCCCHHHHHHCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEECCHHHHHHH LKMLQINHA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA