| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218697877
Identifier: 218697877
GI number: 218697877
Start: 4793356
End: 4794270
Strand: Reverse
Name: 218697877
Synonym: EC55989_4678
Alternate gene names: NA
Gene position: 4794270-4793356 (Counterclockwise)
Preceding gene: 218697878
Following gene: 218697876
Centisome position: 93.0
GC content: 56.5
Gene sequence:
>915_bases GTGGAGCTGAGCCGTGCCACACTGGGTCGCTGGACCGGTGCCGTTGCTGAACTGCTGGAGCCGCTGTATGACGTCCTGCG CCAGTATGTACTGATGCCCGGTAAAGTTCATGCGGATGATATCCCCGTTCCGGTCCAGGAGCCGGGCAGTGGTAAAACAA GAACTGCCCGGCTGTGGGTCTATGTCCGTGATGACCGTAACGCCGGTTCACAGATGCCCCCGGCGGTCTGGTTCGCGTAC AGCCCGGACCGGAAAGGTATCCATCCACAGAATCACCTAGCCGGTTACAGCGGTGTGCTTCAGGCAGATGCTTACGGTGG TTACCGGGCGTTATACGAATCCGGCAGAATAACGGAAGCTGCGTGTATGGCCCATGCCCGGAGAAAAATCCACGATGTGC ATGCAAGAGTGCCAACCGACATCACCACGGAAGCCCTGCAGCGTATCGGTGAACTGTATACCATCGAGGCAGAAGTCCGG GGATGTTCAGCAGAACAGCGTCTGGCGGCAAGAAAAGCAAGAGCCGCGCCACTGATGCAGTCACTGTATGACCGGATACA GCAACAGATGAAAACACTGTCGCGTCACTCGGATACGGCAAAAGCGTTCGCATACCTACTGAAACAGTGGAAGGCCCTGA ACGTGTACTGCAGTAATGGCTGGGTGGAAATCGACAACAACATCGCAGAGAACGCCTTACGGGGAGTGGCCGTAGGCCGG AAAAACTGGCTCTTCGCGGGTTCCGACAGCGGTGGCGAACATGCGGTGGTGTTGTACTCGCTGATCGGCACATGCCGTCT GAACAATGTAGAGCCAGAAAAATGGCTGCGTTACGTTATTGAGCATCTCCAGGACTGGCCGGCAAACCGGGTACGCGATC TGTTGCCCTGGAAAGTTGATCTGACCTCTCAGTAA
Upstream 100 bases:
>100_bases GTCCACTGGCATGAAAATCTCCACCCAGGTTGCGGAAGAGCCACTTTTCATCCGTCGTTGACAGTTATACCGCCAGTCAG AAATATACCGTCGTCAGGGC
Downstream 100 bases:
>100_bases ATATCAATACGGTTCTGGCGAGCCGCTTACGTGCAGCAGTCTTATCCGGCAGTTTAAAGGGGAGGACGGAGACCAATGAG GCACTGGAGCAGATTCAGTG
Product: conserved hypothetical protein, putative transposase (fragment)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAY SPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEAACMAHARRKIHDVHARVPTDITTEALQRIGELYTIEAEVR GCSAEQRLAARKARAAPLMQSLYDRIQQQMKTLSRHSDTAKAFAYLLKQWKALNVYCSNGWVEIDNNIAENALRGVAVGR KNWLFAGSDSGGEHAVVLYSLIGTCRLNNVEPEKWLRYVIEHLQDWPANRVRDLLPWKVDLTSQ
Sequences:
>Translated_304_residues MELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAY SPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEAACMAHARRKIHDVHARVPTDITTEALQRIGELYTIEAEVR GCSAEQRLAARKARAAPLMQSLYDRIQQQMKTLSRHSDTAKAFAYLLKQWKALNVYCSNGWVEIDNNIAENALRGVAVGR KNWLFAGSDSGGEHAVVLYSLIGTCRLNNVEPEKWLRYVIEHLQDWPANRVRDLLPWKVDLTSQ >Mature_304_residues MELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSQMPPAVWFAY SPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEAACMAHARRKIHDVHARVPTDITTEALQRIGELYTIEAEVR GCSAEQRLAARKARAAPLMQSLYDRIQQQMKTLSRHSDTAKAFAYLLKQWKALNVYCSNGWVEIDNNIAENALRGVAVGR KNWLFAGSDSGGEHAVVLYSLIGTCRLNNVEPEKWLRYVIEHLQDWPANRVRDLLPWKVDLTSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 34237; Mature: 34237
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE YVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEA EEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEEECCCCCCHHHHHHCCCCHHH ACMAHARRKIHDVHARVPTDITTEALQRIGELYTIEAEVRGCSAEQRLAARKARAAPLMQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEHHHCCCCHHHHHHHHHHHHHHHHH SLYDRIQQQMKTLSRHSDTAKAFAYLLKQWKALNVYCSNGWVEIDNNIAENALRGVAVGR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHHHHHHCCC KNWLFAGSDSGGEHAVVLYSLIGTCRLNNVEPEKWLRYVIEHLQDWPANRVRDLLPWKVD CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEE LTSQ CCCC >Mature Secondary Structure MELSRATLGRWTGAVAELLEPLYDVLRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE YVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQADAYGGYRALYESGRITEA EEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCEEECCCCCCHHHHHHCCCCHHH ACMAHARRKIHDVHARVPTDITTEALQRIGELYTIEAEVRGCSAEQRLAARKARAAPLMQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEHHHCCCCHHHHHHHHHHHHHHHHH SLYDRIQQQMKTLSRHSDTAKAFAYLLKQWKALNVYCSNGWVEIDNNIAENALRGVAVGR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEECCCEEEECCHHHHHHHHHHHCCC KNWLFAGSDSGGEHAVVLYSLIGTCRLNNVEPEKWLRYVIEHLQDWPANRVRDLLPWKVD CCEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEE LTSQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]