| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is phnP
Identifier: 218697795
GI number: 218697795
Start: 4699032
End: 4699790
Strand: Reverse
Name: phnP
Synonym: EC55989_4583
Alternate gene names: 218697795
Gene position: 4699790-4699032 (Counterclockwise)
Preceding gene: 218697796
Following gene: 218697792
Centisome position: 91.17
GC content: 58.76
Gene sequence:
>759_bases ATGAGCCTGACCCTCACGCTCACCGGCACTGGCGGCGCACAGGGCGTTCCGGCATGGGGCTGCGAGTGCGCGGCCTGCGC CAGAGCGCGGCGCTCGCCGCAGTATCGCCGCCAGCCATGCAGCGGCGTAGTGAAGTTTAACGACGCGATCACCCTGATCG ACGCCGGGCGGCACGATCTCACCGATCGCTGGTCGCCTGGATCGTTCCAGCAGTTTTTGCTGACGCACTACCATATGGAT CACGTCCAAGGGCTATTTCCGCTACGCTGGGGCGTGGGCGATGTGATCCCGGTCTACGGCCCGCCGGATGAACAGGGCTG CGACGATCTGTTTAAACATCCGGGCCTGCTTGATTTCAGCCACACAGTGGAACCGTTTGTGGTGTTTGATTTGCAGGGGT TGCAGGTCACGCCGCTGCCGCTTAACCACTCAAAACTGACCTTCGGTTATCTGCTGGAAACGGCACATAGCCGGGTGGCG TGGCTGTCTGACACCGCTGGCCTGCCGGAAAAAACGCTGAAATTTTTACTCAATAATCATCCGCAGGTGATGGTGATTGA TTGCAGTCACCCGCCGCGCGCGGATGCACCGCGTAATCACTGTGATTTAAATACCGTGCTTGCGCTGAATCAGGTTATCC GCTCGCCACAGGTGATTCTGACCCATATCAGCCACCAGTTTGATGCGTGGCTGATGGAAAACGCACTACCGTCAGGGTTT GAGGTGGGGTTTGATGGGATGGAGATTGGGGTGGCGTGA
Upstream 100 bases:
>100_bases ACCGAGCTTTCCACCAACGTGAAGCGCCACGACGCACACCGTTTTTACCTGCGTGAAGGCTACGAGCAGAGCCACTTCCG CTTCACCAAGGCGCTGTAAC
Downstream 100 bases:
>100_bases TGAGAGGGAATGTGCGCGCTGGCCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGAGGGGACCGATTGTGCTCAATATTG AATATTGCGCTCGTTTTCTC
Product: carbon-phosphorus lyase complex accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGRHDLTDRWSPGSFQQFLLTHYHMD HVQGLFPLRWGVGDVIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVA WLSDTAGLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQFDAWLMENALPSGF EVGFDGMEIGVA
Sequences:
>Translated_252_residues MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGRHDLTDRWSPGSFQQFLLTHYHMD HVQGLFPLRWGVGDVIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVA WLSDTAGLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQFDAWLMENALPSGF EVGFDGMEIGVA >Mature_251_residues SLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGRHDLTDRWSPGSFQQFLLTHYHMDH VQGLFPLRWGVGDVIPVYGPPDEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAW LSDTAGLPEKTLKFLLNNHPQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQFDAWLMENALPSGFE VGFDGMEIGVA
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790530, Length=252, Percent_Identity=97.2222222222222, Blast_Score=485, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017693 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 27843; Mature: 27712
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGRHDL CEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCEEEECCEEEEEECCCCCC TDRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDVIPVYGPPDEQGCDDLFKHPGLLDFS CCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCCHHHHHHCCCCCCCC HTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLPEKTLKFLLNNH CCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCC PQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQFDAWLMENALPSGF CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC EVGFDGMEIGVA EECCCCEEECCC >Mature Secondary Structure SLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGRHDL EEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCEEEECCEEEEEECCCCCC TDRWSPGSFQQFLLTHYHMDHVQGLFPLRWGVGDVIPVYGPPDEQGCDDLFKHPGLLDFS CCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCCHHHHHHCCCCCCCC HTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVAWLSDTAGLPEKTLKFLLNNH CCCCCEEEEEECCCEEECCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHCCC PQVMVIDCSHPPRADAPRNHCDLNTVLALNQVIRSPQVILTHISHQFDAWLMENALPSGF CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC EVGFDGMEIGVA EECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]