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The map label for this gene is yjbM

Identifier: 218697756

GI number: 218697756

Start: 4652425

End: 4653171

Strand: Direct

Name: yjbM

Synonym: EC55989_4541

Alternate gene names: 218697756

Gene position: 4652425-4653171 (Clockwise)

Preceding gene: 218697755

Following gene: 218697757

Centisome position: 90.25

GC content: 36.14

Gene sequence:

>747_bases
GTGTTTTTAATTGAGCAAATAAATGATCTCAAAATGTGGGTCAATAAGTATATTGACGATTGCACTGATGAGGATTTAAA
CGATCGTGACTTTATTGCATCAGTTGTTGACCGGGCTATTTTTCATTTCGCGATTAATAGTATATGTAATCCTGGGGCTA
ATAAAGATGCGACTCCCATTGAACGATGTACTTTTGATGTAGAAACTAAGAATGACCTTCCCTCCACGGTTCAGCTATTT
TATGAGGAATCTAAGGATAATGAACCTTTAGCGAATATACATTTTCAAGCAATAGGTTCTGGTTTTTTAACGTTTGTTAA
TGCCTGCCAGGAACATGATGACAACAGCTTAAAATTATTTGCTTCGCTGTTAATTTCACTTTCATATTCTAGTGCCTACA
CAGATTTAGCCGGAGCAGAAAAAGTGAATATTAATGAATATAATGAGAACTATCTGACAGCTCAGTTTGAAGAATTATCT
CAACGTGATATGAAGAAGTACCTGGGAGAGATGAAGCATCTGGCGGACCGGGGGGGGATGAAATTTGATGACTATCTGGA
TAAAATGTCACTTCTGGTGAATGAAGGAAAGCTCGAACCTGATATTTTAAGCAAAATGCGAGATGCTGCACCGAAATTAA
TTGACTTTGCTAAGTCGTTTGACCCAAACTCAAAGGAAAAGATTAAAATACTTACAGATACTTCTAATTTAATTTATGAT
TTATTCGGGGTTAAATCGGCGAAATAA

Upstream 100 bases:

>100_bases
TTGATTATGCAGCGCTGCGTCATCGGGATATAATTATTGCAAAAATAGATTTGTTTATTCAACGAATCACGCATAATTTA
TGGCATGCACGTAAAAAAAT

Downstream 100 bases:

>100_bases
TATGTGAAGTTCTTCGATGGTATGGAAGGCATTACATAAAAGAACCTAATACTTATTGGGTTCTTTTTTCTTCTATCAGT
GCCATTAGCAGGAAGAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFLIEQINDLKMWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGANKDATPIERCTFDVETKNDLPSTVQLF
YEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYTDLAGAEKVNINEYNENYLTAQFEELS
QRDMKKYLGEMKHLADRGGMKFDDYLDKMSLLVNEGKLEPDILSKMRDAAPKLIDFAKSFDPNSKEKIKILTDTSNLIYD
LFGVKSAK

Sequences:

>Translated_248_residues
MFLIEQINDLKMWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGANKDATPIERCTFDVETKNDLPSTVQLF
YEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYTDLAGAEKVNINEYNENYLTAQFEELS
QRDMKKYLGEMKHLADRGGMKFDDYLDKMSLLVNEGKLEPDILSKMRDAAPKLIDFAKSFDPNSKEKIKILTDTSNLIYD
LFGVKSAK
>Mature_248_residues
MFLIEQINDLKMWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGANKDATPIERCTFDVETKNDLPSTVQLF
YEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLFASLLISLSYSSAYTDLAGAEKVNINEYNENYLTAQFEELS
QRDMKKYLGEMKHLADRGGMKFDDYLDKMSLLVNEGKLEPDILSKMRDAAPKLIDFAKSFDPNSKEKIKILTDTSNLIYD
LFGVKSAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790482, Length=237, Percent_Identity=88.6075949367088, Blast_Score=401, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020404
- ProDom:   PD116985 [H]

Pfam domain/function: PF10897 DUF2713 [H]

EC number: NA

Molecular weight: Translated: 28208; Mature: 28208

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLIEQINDLKMWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGANKDATPI
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ERCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLF
HHHEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ASLLISLSYSSAYTDLAGAEKVNINEYNENYLTAQFEELSQRDMKKYLGEMKHLADRGGM
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KFDDYLDKMSLLVNEGKLEPDILSKMRDAAPKLIDFAKSFDPNSKEKIKILTDTSNLIYD
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH
LFGVKSAK
HHHCCCCC
>Mature Secondary Structure
MFLIEQINDLKMWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGANKDATPI
CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ERCTFDVETKNDLPSTVQLFYEESKDNEPLANIHFQAIGSGFLTFVNACQEHDDNSLKLF
HHHEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
ASLLISLSYSSAYTDLAGAEKVNINEYNENYLTAQFEELSQRDMKKYLGEMKHLADRGGM
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KFDDYLDKMSLLVNEGKLEPDILSKMRDAAPKLIDFAKSFDPNSKEKIKILTDTSNLIYD
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH
LFGVKSAK
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]