| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yjbI
Identifier: 218697746
GI number: 218697746
Start: 4642813
End: 4644141
Strand: Direct
Name: yjbI
Synonym: EC55989_4530
Alternate gene names: 218697746
Gene position: 4642813-4644141 (Clockwise)
Preceding gene: 218697745
Following gene: 218697747
Centisome position: 90.07
GC content: 33.26
Gene sequence:
>1329_bases ATGAAAAAAATTGAATGCGCTTGCAATTTTCTGATGGATAAAGATGCGCAGGGGTATATCGACCTGTCTGATTTGGATTT AACAAGTTGTCATTTTAAAGGTGACGTTATATCGAAGGTGTCTTTTTTATCATCAAATCTACAACATGTAACATTCGAAT GTAAAGAAATTGGGGATTGCAATTTTACTACTGCAATAGTTGATAATGTCATATTTAGATGTCGACGTTTACACAATGTG ATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACT TACTCAGAGTAATTTTCGCGAATATCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCA GAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAATATGACAGCTGTTATGTTTGATCATGTGCGAATA TCGACAGGGAATTTTAAAGATTGCATTACAGAACAATTGGAATTAACTATTGATTATTCAGATATATTTGGGAATGAAGA TCTCGATGGTTATATCAATAACATTATAAAAATGATTGATACATTGCCAGATAATGCAATGATATTGAAATCCGTTCTGG CAGTAAAACTGGTTATGCAATTAAAAATTCTTAATATTGTTAATAAAAACTTTATTGAGAATATGAAGAAAACATTTAGC CATTGTCCTTATATAAAAGATCCAATTATACGCAGTTATATCCATTCTGGTGAAGATAACAAGTTCGATGATTTTATGCG TCAACATCGATTCAGCAAGGTGGATTTCGATACCCAACAGATGATCCATTTTATTAACAGGTTTAATATGAATAAAGGGC TGATTGATAAAAATAACAATTTTTTTATCCAACTTATCGATCAGGCCTTACGATCAACGGATGATATGATCAAAGCAAAT GCCTGGTATCTTTATAAAGAGTGGATTCGTAGTGATGATGTTTCACCTATATTTATAGAAACTGAAGAAAAGTTAAGAAC CTTTAACACTAATAAATTAACACGAAACGATAATATATTTATCCTGTTCTCCTCTGTCGATGATGGGCCTGTTATGGTGG TAAGCTCCCAGCGCTTACATGATATGTTGAATCCTACAAAAGATACCAATTGGAATTCCACGTATATCTACAAATCCAGA CATGAGATGTTGCCTGTTAATCTTACTCAGGAAACACTTTTCAGCTCCAAATCTCATGGTAAATATGCGCTTTTCCCCAT TTTTACTGCGAGTTGGCGAGCTCATCGTATAATGAATAAGGGTGTTTAA
Upstream 100 bases:
>100_bases TTTTTCAAATATAAAACAACGGAACGAAAAAATCATGCAATAAATATGTTTCGTGAAGTCTCAATCAGTAATGATACTAT AAGTGTAAAATTCTACAGAA
Downstream 100 bases:
>100_bases GTAAAGGAAAACATCACCGTTCCTGGCATCCTGGGCGGTGATGCCCCTATGGTTGCCCTCTCCAGCGCGGGCATCGGCAA AGCGTAAGGTTCAACAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNV IFIKASGECVDFSKNILDTVDFSQSQLTQSNFREYQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNMTAVMFDHVRI STGNFKDCITEQLELTIDYSDIFGNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFS HCPYIKDPIIRSYIHSGEDNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNNFFIQLIDQALRSTDDMIKAN AWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIFILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSR HEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRIMNKGV
Sequences:
>Translated_442_residues MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNV IFIKASGECVDFSKNILDTVDFSQSQLTQSNFREYQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNMTAVMFDHVRI STGNFKDCITEQLELTIDYSDIFGNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFS HCPYIKDPIIRSYIHSGEDNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNNFFIQLIDQALRSTDDMIKAN AWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIFILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSR HEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRIMNKGV >Mature_442_residues MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDCNFTTAIVDNVIFRCRRLHNV IFIKASGECVDFSKNILDTVDFSQSQLTQSNFREYQIRNSNFDNCYLYASHFTRAEFLSAKEISFIKSNMTAVMFDHVRI STGNFKDCITEQLELTIDYSDIFGNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFS HCPYIKDPIIRSYIHSGEDNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNNFFIQLIDQALRSTDDMIKAN AWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIFILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSR HEMLPVNLTQETLFSSKSHGKYALFPIFTASWRAHRIMNKGV
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51526; Mature: 51526
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDC CCCHHHHHHHHCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEHHCCCC NFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNILDTVDFSQSQLTQSNFREYQIRNS CHHHHHHHHHHHHHHHHCCEEEEEECCCEECCHHHHHHHCCCCHHHHHHHHCCEEEECCC NFDNCYLYASHFTRAEFLSAKEISFIKSNMTAVMFDHVRISTGNFKDCITEQLELTIDYS CCCCEEEEECCCCHHHHHCHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHEEEEEHH DIFGNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFS HHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HCPYIKDPIIRSYIHSGEDNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNN HCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEECCCC FFIQLIDQALRSTDDMIKANAWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIF EEHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCEECCCCEE ILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHG EEEECCCCCCEEEEECHHHHHHCCCCCCCCCCCEEEECCCCCEECCCCCHHHHHCCCCCC KYALFPIFTASWRAHRIMNKGV CEEEEEEEECCHHHHHHHHCCC >Mature Secondary Structure MKKIECACNFLMDKDAQGYIDLSDLDLTSCHFKGDVISKVSFLSSNLQHVTFECKEIGDC CCCHHHHHHHHCCCCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEHHCCCC NFTTAIVDNVIFRCRRLHNVIFIKASGECVDFSKNILDTVDFSQSQLTQSNFREYQIRNS CHHHHHHHHHHHHHHHHCCEEEEEECCCEECCHHHHHHHCCCCHHHHHHHHCCEEEECCC NFDNCYLYASHFTRAEFLSAKEISFIKSNMTAVMFDHVRISTGNFKDCITEQLELTIDYS CCCCEEEEECCCCHHHHHCHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHHEEEEEHH DIFGNEDLDGYINNIIKMIDTLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFS HHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HCPYIKDPIIRSYIHSGEDNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNN HCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEECCCC FFIQLIDQALRSTDDMIKANAWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIF EEHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCCEEEEECHHHHHHCCCCCEECCCCEE ILFSSVDDGPVMVVSSQRLHDMLNPTKDTNWNSTYIYKSRHEMLPVNLTQETLFSSKSHG EEEECCCCCCEEEEECHHHHHHCCCCCCCCCCCEEEECCCCCEECCCCCHHHHHCCCCCC KYALFPIFTASWRAHRIMNKGV CEEEEEEEECCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 8409922 [H]