| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is ycgL [H]
Identifier: 218697727
GI number: 218697727
Start: 4622070
End: 4622870
Strand: Direct
Name: ycgL [H]
Synonym: EC55989_4510
Alternate gene names: 218697727
Gene position: 4622070-4622870 (Clockwise)
Preceding gene: 218697726
Following gene: 218697730
Centisome position: 89.66
GC content: 54.06
Gene sequence:
>801_bases GTGAGTAACATGCCATTAAATGGAGTCAGTGCTGCGATGCGCGAACGGGTATCGCAGCAGTTAAAAGAAATAGAACGGCG CTACGGCGTGAAAGTGCTGTATGCCTGTGAATCCGGGAGCCGCGGCTGGGGGTTTGCCTCGCCCGACAGCGACTACGATG TACGGTTTTTGTATGTTCACCCGCTGGAATGGTATCTGCGGGTGGAGCCGCCGCGCGATGTTATCGAGCTGCCCATCGAC GACGAGTTAGATGTTTCCGGTTGGGAGTGGCGTAAGGCGCTGGGATTATTGAAAGGCGCGAACCCGACGCTGATAGAATG GCTGGATTCTCCGGTTGTCTATCAACAAGATGAAGAAACGATAACGGCGCTTAAGGCAATGGTCCCAATGTGGTTTTCTC CGCTGCGTGCGCGCTGGCATTACTATTCGATGGCGCAGAAAAACTTCCGCGGATATTTGCAGGGCGATGAAGTTCGACTG AAAAAATACTTTTACGTGCTGCGTCCGCTGCTGGCCGTGCGCTGGGTCGAAGCGGGAAAAGGCGTGCCGCCAATGCGCTT TGCTGAGTTACTGGCGGGAAGCGAACTTGATGCGCCGTTACGTGCAGAAATAGACGAATTACTGGAACGTAAACAGCGCG CAGGAGAAGCGGAATATGGTCCGCGCCGTCCATTGTTACATGCGTTTATTTGTGCGGAACAGGCGCGTGGGGAAATTCCA CCGCTGTTACCGGATAGCAGAGAAGGGGACGTTAAGGAACTGGATAGCTTAATGTACCAGACGGTAATGCGCCGGGCATA A
Upstream 100 bases:
>100_bases AAGAGCTAGAAACGCTGGAGAGAGTGGCTGAGCGGATCGATAACATCTCTGTATTTGGCGGTCTGGATCAGGTTCTGCAT GGGTTGGTTAATATCAAAGG
Downstream 100 bases:
>100_bases AGCCCGGCGTTATTTCACGCCATCAGCTCTTATTATTATTGTGTATTCCCGCTGATTTCATTCTGTATAAGTGTTGCAAT ATCGTCATTCGTTGCCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSNMPLNGVSAAMRERVSQQLKEIERRYGVKVLYACESGSRGWGFASPDSDYDVRFLYVHPLEWYLRVEPPRDVIELPID DELDVSGWEWRKALGLLKGANPTLIEWLDSPVVYQQDEETITALKAMVPMWFSPLRARWHYYSMAQKNFRGYLQGDEVRL KKYFYVLRPLLAVRWVEAGKGVPPMRFAELLAGSELDAPLRAEIDELLERKQRAGEAEYGPRRPLLHAFICAEQARGEIP PLLPDSREGDVKELDSLMYQTVMRRA
Sequences:
>Translated_266_residues MSNMPLNGVSAAMRERVSQQLKEIERRYGVKVLYACESGSRGWGFASPDSDYDVRFLYVHPLEWYLRVEPPRDVIELPID DELDVSGWEWRKALGLLKGANPTLIEWLDSPVVYQQDEETITALKAMVPMWFSPLRARWHYYSMAQKNFRGYLQGDEVRL KKYFYVLRPLLAVRWVEAGKGVPPMRFAELLAGSELDAPLRAEIDELLERKQRAGEAEYGPRRPLLHAFICAEQARGEIP PLLPDSREGDVKELDSLMYQTVMRRA >Mature_265_residues SNMPLNGVSAAMRERVSQQLKEIERRYGVKVLYACESGSRGWGFASPDSDYDVRFLYVHPLEWYLRVEPPRDVIELPIDD ELDVSGWEWRKALGLLKGANPTLIEWLDSPVVYQQDEETITALKAMVPMWFSPLRARWHYYSMAQKNFRGYLQGDEVRLK KYFYVLRPLLAVRWVEAGKGVPPMRFAELLAGSELDAPLRAEIDELLERKQRAGEAEYGPRRPLLHAFICAEQARGEIPP LLPDSREGDVKELDSLMYQTVMRRA
Specific function: Unknown
COG id: COG3541
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018775 [H]
Pfam domain/function: PF10127 Nuc-transf [H]
EC number: NA
Molecular weight: Translated: 30749; Mature: 30617
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNMPLNGVSAAMRERVSQQLKEIERRYGVKVLYACESGSRGWGFASPDSDYDVRFLYVH CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEE PLEWYLRVEPPRDVIELPIDDELDVSGWEWRKALGLLKGANPTLIEWLDSPVVYQQDEET CEEEEEEECCCHHHEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEECCHHH ITALKAMVPMWFSPLRARWHYYSMAQKNFRGYLQGDEVRLKKYFYVLRPLLAVRWVEAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GVPPMRFAELLAGSELDAPLRAEIDELLERKQRAGEAEYGPRRPLLHAFICAEQARGEIP CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC PLLPDSREGDVKELDSLMYQTVMRRA CCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SNMPLNGVSAAMRERVSQQLKEIERRYGVKVLYACESGSRGWGFASPDSDYDVRFLYVH CCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEE PLEWYLRVEPPRDVIELPIDDELDVSGWEWRKALGLLKGANPTLIEWLDSPVVYQQDEET CEEEEEEECCCHHHEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEECCHHH ITALKAMVPMWFSPLRARWHYYSMAQKNFRGYLQGDEVRLKKYFYVLRPLLAVRWVEAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GVPPMRFAELLAGSELDAPLRAEIDELLERKQRAGEAEYGPRRPLLHAFICAEQARGEIP CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCC PLLPDSREGDVKELDSLMYQTVMRRA CCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]