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The map label for this gene is yiiF

Identifier: 218697605

GI number: 218697605

Start: 4461717

End: 4461935

Strand: Direct

Name: yiiF

Synonym: EC55989_4367

Alternate gene names: 218697605

Gene position: 4461717-4461935 (Clockwise)

Preceding gene: 218697604

Following gene: 218697610

Centisome position: 86.55

GC content: 46.12

Gene sequence:

>219_bases
ATGGGCAGAATTTTACTCGATTTATCGAATGAGGTGATTAAGCAACTTGATGATCTCGAGGTGCAGCGTAATCTTCCTCG
TGCGGACCTATTAAGGGAAGCGGTAGATCAATACCTGATAAATCAATCGCAAACAGCAAGAACCAGTGTTCCTGGCATCT
GGCAAGGGTGTGAGGAAGATGGTGTCGAATATCAGCGTAAGCTGCGCGAGGAATGGTAA

Upstream 100 bases:

>100_bases
AAATGAGCTTTCTTTAAAGATTCGACAAGGGTACTTTTCTCTCCATAGATTCAAAAATGATATTGGCGAGATATTTATGA
ACTCTCTGGTAGGTATAGAT

Downstream 100 bases:

>100_bases
TGGGAAAAAATGATGTCAATCAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGC
CTACAAAGTCATGCAAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW

Sequences:

>Translated_72_residues
MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW
>Mature_71_residues
GRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yiiE

Homologues:

Organism=Escherichia coli, GI87082347, Length=72, Percent_Identity=100, Blast_Score=145, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIIF_ECOLI (P0AFU6)

Other databases:

- EMBL:   L19201
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S40834
- RefSeq:   AP_003918.1
- RefSeq:   NP_418326.2
- ProteinModelPortal:   P0AFU6
- SMR:   P0AFU6
- STRING:   P0AFU6
- EnsemblBacteria:   EBESCT00000001169
- EnsemblBacteria:   EBESCT00000014302
- GeneID:   948385
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5563
- KEGG:   eco:b3890
- EchoBASE:   EB1801
- EcoGene:   EG11855
- eggNOG:   NOG09875
- GeneTree:   EBGT00050000009882
- HOGENOM:   HBG665368
- OMA:   CEEDGME
- ProtClustDB:   CLSK880811
- BioCyc:   EcoCyc:EG11855-MONOMER
- Genevestigator:   P0AFU6

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8443; Mature: 8311

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEED
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCCCCC
GVEYQRKLREEW
CHHHHHHHHHCC
>Mature Secondary Structure 
GRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEED
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCCCCC
GVEYQRKLREEW
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503