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The map label for this gene is yihM

Identifier: 218697587

GI number: 218697587

Start: 4444824

End: 4445804

Strand: Direct

Name: yihM

Synonym: EC55989_4349

Alternate gene names: 218697587

Gene position: 4444824-4445804 (Clockwise)

Preceding gene: 218697586

Following gene: 218697588

Centisome position: 86.23

GC content: 43.83

Gene sequence:

>981_bases
ATGGTGACAATAAATAACGCAAGAAAGATTCTACAACGTGTCGACACTCTTCCTCTTTATTTACATGCTTATGCCTTTCA
TTTAAATATGCGGCTGGAAAGAGTGTTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAA
TCCATGTTCTGGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGCCCGC
CGTCTGAACCTTGATATTCATATTGAAACCAGCGCTTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATTGCGTTGAA
AACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTGCGCGACGTATTATCGATCATCGCTAACGACA
TTGCCTATGTACGGGAAACGTATCAGGACAGCGGCCTGACTTTTACGATCGAACAGCATGAAGATTTAAAAAGCCATGAG
CTGGTGTCGCTGGTCAAAGAAAGTGAGATGGAATCTCTTTCCTTACTGTTTGATTTTGCGAACATGATCAATGCAAATGA
GCATCCCATCGACGCTTTAAAAACGATGGCGCCGCATATTACCCAGGTCCATATCAAAGATGCCTTGATCGTTAAAGAAC
CGGGTGGCCTGGGTCATAAAGCCTGTATTTCAGGTCAGGGTGATATGCCGTTCAAAGCGTTATTAACGCACCTTATATGC
CTGGGTGATGATGAGCCGCAGGTGACGGCATATGGCCTGGAAGAAGAGGTTGATTACTATGCGCCGGCGTTCCGCTTTGA
AGACGAAGATGATAATCCGTGGATCCCTTATCGCCAGATGAGTGAAACACCATTGCCAGAAAATCATTTACTGGATGCGC
GGTTACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCA
AACCATCTTCTGAACCACTAA

Upstream 100 bases:

>100_bases
GAAAAGCATCGCGCCGACCAGCAAGGCAATATTGTCCAGATAGATATTGAATATTGGCGATTTGAGGCCGTAGACCTCAT
CATTAATCTGTAGGTGTTTT

Downstream 100 bases:

>100_bases
TAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATATGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTT
AAAAATCGCTTAGGGGATGT

Product: putative sugar phosphate isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKAR
RLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHE
LVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLIC
LGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEA
NHLLNH

Sequences:

>Translated_326_residues
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKAR
RLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHE
LVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLIC
LGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEA
NHLLNH
>Mature_326_residues
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKAR
RLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHE
LVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLIC
LGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKEDAINQINHVRNVLQQIKQEA
NHLLNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790305, Length=326, Percent_Identity=100, Blast_Score=671, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIHM_ECOLI (P32134)

Other databases:

- EMBL:   L19201
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   S40818
- RefSeq:   AP_003935.1
- RefSeq:   NP_418309.1
- ProteinModelPortal:   P32134
- DIP:   DIP-12494N
- MINT:   MINT-1289780
- STRING:   P32134
- PRIDE:   P32134
- EnsemblBacteria:   EBESCT00000003688
- EnsemblBacteria:   EBESCT00000017161
- GeneID:   948367
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3844
- KEGG:   eco:b3873
- EchoBASE:   EB1785
- EcoGene:   EG11839
- eggNOG:   NOG09292
- GeneTree:   EBGT00050000010719
- HOGENOM:   HBG467445
- OMA:   YYASAFR
- ProtClustDB:   CLSK880799
- BioCyc:   EcoCyc:EG11839-MONOMER
- Genevestigator:   P32134
- InterPro:   IPR013022
- InterPro:   IPR012307
- Gene3D:   G3DSA:3.20.20.150

Pfam domain/function: PF01261 AP_endonuc_2; SSF51658 Xyl_isomerase-like_TIM-brl

EC number: NA

Molecular weight: Translated: 36942; Mature: 36942

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGE
CEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEECCC
RFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYE
EEECCCCCHHHHHHHCCHHEEEEEEEEEECCCCCCHHHHHHHEEEEECCCCCEEEECCCC
GNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFA
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLIC
HHCCCCCCCHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHEECCCCCCCHHHHHHHHHH
LGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKE
CCCCCCCEEEECCHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DAINQINHVRNVLQQIKQEANHLLNH
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGE
CEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEECCC
RFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYE
EEECCCCCHHHHHHHCCHHEEEEEEEEEECCCCCCHHHHHHHEEEEECCCCCEEEECCCC
GNLRDVLSIIANDIAYVRETYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFA
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NMINANEHPIDALKTMAPHITQVHIKDALIVKEPGGLGHKACISGQGDMPFKALLTHLIC
HHCCCCCCCHHHHHHHCCCCEEEEEEEEEEEECCCCCCCHHEECCCCCCCHHHHHHHHHH
LGDDEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPENHLLDARLRKEKE
CCCCCCCEEEECCHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
DAINQINHVRNVLQQIKQEANHLLNH
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503