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The map label for this gene is yidQ

Identifier: 218697410

GI number: 218697410

Start: 4242889

End: 4243221

Strand: Direct

Name: yidQ

Synonym: EC55989_4157

Alternate gene names: 218697410

Gene position: 4242889-4243221 (Clockwise)

Preceding gene: 218697406

Following gene: 218697412

Centisome position: 82.31

GC content: 53.75

Gene sequence:

>333_bases
ATGATAAGAAATGTGTTGTTAGCGTTCATGATATGCAGCGGAATGACATTACTCGGAGGATGCTCCAGCGTGATGTCCCA
TACCGGAGGGAAAGAAGGAACGTATCCCGGCACCCGCGCCAGCGCAACCATGATTGGCGACGATGAAACCAACTGGGGCA
CTAAGTCGCTGGCGATTCTCGATATGCCGTTTACCGCTGTGATGGACACGCTTTTACTGCCGTGGGATGTGTTCCGCAAA
GACAGCTCGGTGCGCTCGCGCGTTGAAAAAAGCGAAGCCAACGCGCAAGCCACCAATGCGGTTATTCCACCGGCCAGAAT
GCCTGATAACTGA

Upstream 100 bases:

>100_bases
GCGATAGCCGCCACAGTGCGACGTAATGATGATGTTATTTTCAGCAAGGGATCGCTATAACTCATCAGGCCAACACCCAC
GATCAACAGATGAATTTATT

Downstream 100 bases:

>100_bases
TTTAGCGATCAGTTTCGGTGATCCACAGCTGGCCGCCTTCCATCCACGCCAGCCACTGACCATCCGGCGAGAAGACCACG
GCGTCCGCAGAAGGTGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRK
DSSVRSRVEKSEANAQATNAVIPPARMPDN

Sequences:

>Translated_110_residues
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRK
DSSVRSRVEKSEANAQATNAVIPPARMPDN
>Mature_110_residues
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRK
DSSVRSRVEKSEANAQATNAVIPPARMPDN

Specific function: Unknown

COG id: COG5645

COG function: function code R; Predicted periplasmic lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yceK

Homologues:

Organism=Escherichia coli, GI87082317, Length=110, Percent_Identity=100, Blast_Score=228, Evalue=8e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIDQ_ECOLI (P0ADM4)

Other databases:

- EMBL:   L10328
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_004105.1
- RefSeq:   NP_418143.2
- ProteinModelPortal:   P0ADM4
- STRING:   P0ADM4
- EnsemblBacteria:   EBESCT00000004464
- EnsemblBacteria:   EBESCT00000018294
- GeneID:   948199
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5633
- KEGG:   eco:b3688
- EchoBASE:   EB1663
- EcoGene:   EG11712
- eggNOG:   COG5645
- GeneTree:   EBGT00050000011696
- HOGENOM:   HBG637025
- OMA:   LLPWDMF
- ProtClustDB:   PRK11616
- BioCyc:   EcoCyc:EG11712-MONOMER
- Genevestigator:   P0ADM4
- InterPro:   IPR010780

Pfam domain/function: PF07119 DUF1375

EC number: NA

Molecular weight: Translated: 11826; Mature: 11826

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAIL
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE
DMPFTAVMDTLLLPWDVFRKDSSVRSRVEKSEANAQATNAVIPPARMPDN
ECCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATMIGDDETNWGTKSLAIL
CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE
DMPFTAVMDTLLLPWDVFRKDSSVRSRVEKSEANAQATNAVIPPARMPDN
ECCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503