| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is yibG
Identifier: 218697317
GI number: 218697317
Start: 4140073
End: 4140534
Strand: Direct
Name: yibG
Synonym: EC55989_4059
Alternate gene names: 218697317
Gene position: 4140073-4140534 (Clockwise)
Preceding gene: 218697316
Following gene: 218697320
Centisome position: 80.31
GC content: 32.25
Gene sequence:
>462_bases ATGAAAGCATGCTTGTTACTATTTTTTTATTTTTCTCTTATTGGTCAATTGCATGGTGCTGATGTGAAAATAAAAGAAAA CGAAAGTGTGATGGGATCTACAGCAATGACCTATGATTTAAGTGAAGAAAAGCTGATGAAACTGAAGTATAAATCACAAC ATGGTGATTCAGAGGCATCATTTCGACTATATCAATATTACTGCTTTACTAAAAATAATATTGATAAACAATTGCGATTC TTGGAAAGATCAGCATCTCAGGGGAATGTTACAGCGCAGTTTAATTATGGGGTCTTTTTATCAGATACAAATCCAACATT ATCAGAATATTATAATTTGAATAGAGCTATTTATTGGATGGAATTCGCTGTAAATAACGGTAATATTGATACAAAGAGCA AACTTCAAGAGCTCAAAAAGCTAAAGCGAATGGATAGAAGGAAGAATAAGGAGAATCCGTAA
Upstream 100 bases:
>100_bases ACCTTGGTAATTGGATAACATATGGGCCATCTGGGCACCCCATTTCTAATATGCAAGGTACGCCAGAAAAACCCAGTGAT ATAAGATAGGTTGTAGATGT
Downstream 100 bases:
>100_bases AAGCAATAGTTCATCAGACTGCCGCAGCAGTAGTATGATGATGAATCAGGGCTGTACTATAACTATTATCGGTAACATTA ACCGCAGCAGGGGCGGTATA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF-A3 [H]
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRF LERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDTKSKLQELKKLKRMDRRKNKENP
Sequences:
>Translated_153_residues MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRF LERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDTKSKLQELKKLKRMDRRKNKENP >Mature_153_residues MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRF LERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWMEFAVNNGNIDTKSKLQELKKLKRMDRRKNKENP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790023, Length=153, Percent_Identity=96.078431372549, Blast_Score=304, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011990 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17950; Mature: 17950
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEAS CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCC FRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWM EEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCHHHHHCCCEEEEEE EFAVNNGNIDTKSKLQELKKLKRMDRRKNKENP EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKACLLLFFYFSLIGQLHGADVKIKENESVMGSTAMTYDLSEEKLMKLKYKSQHGDSEAS CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCC FRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSDTNPTLSEYYNLNRAIYWM EEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCHHHHHCCCEEEEEE EFAVNNGNIDTKSKLQELKKLKRMDRRKNKENP EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8387990; 8041620; 9278503 [H]