Click here to switch to the map view.

The map label for this gene is yhgA

Identifier: 218697094

GI number: 218697094

Start: 3878477

End: 3879355

Strand: Direct

Name: yhgA

Synonym: EC55989_3819

Alternate gene names: 218697094

Gene position: 3878477-3879355 (Clockwise)

Preceding gene: 218697093

Following gene: 218697096

Centisome position: 75.24

GC content: 47.67

Gene sequence:

>879_bases
ATGAGCAAAAAGCAGAGTTCCACCCCACACGATGCGCTGTTCAAACTCTTTTTACGCCAACCGGACACGGCTCGTGATTT
TCTTGCGTTTCATTTACCGGCACCCATTCACGCGCTTTGTGATATGAAAACCCTCAAGCTGGAGTCGAGCAGCTTTATTG
ATGACGATCTGCGTGAAAGCTATTCCGATGTGCTGTGGTCGGTGAAAACGGAACAAGGACCAGGATACATCTATTGTCTG
ATTGAACATCAAAGCACCTCAAACAAACTGATCGCATTTCGCATGATGCGTTACGCTATTGCCGCAATGCAAAATCACCT
TGATGCTGGATACAAAACGTTGCCGATGGTGGTGCTATTGTTGTTTTACCACGGTATTGAAAGCCCCTATCCCTATTCGC
TGTCTTGGCTGGATTGTTTCGCCGATCCCAAACTGGCAAGGCAGCTTTATGCCTCCGCATTTCCGCTGATTGATGTCACC
GTCATGCCTGATGATGAAATCATGCAGCACCGACGTATGGCGCTGCTGGAGTTAATTCAAAAACATATTCGTCAACGCGA
CCTGATGGGGCTGGTAGAGCAAATGGCCTGCTTATTAAGTAGTGGATACGCTAATGACAGACAAATCAAAGGGCTGTTTA
ATTACATACTGCAAACCGGCGACGCGGTACGTTTTAACGATTTTATCGACGGCGTTGCCGAACGTTCACCGAAACACAAG
GAGAGTTTAATGACAATTGCGGAAAGATTGCGGCAGGAGGGGGAACAATCCAAAGCCCTGCATATAGCCAAAATAATGCT
TGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACTGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAA

Upstream 100 bases:

>100_bases
GTTCCTTTGAAAGCATCTCGCAGGGATGAAAACTCGCTAATACACAGGTGTGGAGTGGCGCGTAGAGTCGCGGCATTCAA
ACAACAGGTGAAGGAACGCC

Downstream 100 bases:

>100_bases
ATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGCCACCAGCAGGTGACAAAACTCGACCGGATGC
GAAATAAACGGCGCATGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCL
IEHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVLLLFYHGIESPYPYSLSWLDCFADPKLARQLYASAFPLIDVT
VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAERSPKHK
ESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDIMRFTGVSEEELAAASQ

Sequences:

>Translated_292_residues
MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCL
IEHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVLLLFYHGIESPYPYSLSWLDCFADPKLARQLYASAFPLIDVT
VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAERSPKHK
ESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDIMRFTGVSEEELAAASQ
>Mature_291_residues
SKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLI
EHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVLLLFYHGIESPYPYSLSWLDCFADPKLARQLYASAFPLIDVTV
MPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAERSPKHKE
SLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDIMRFTGVSEEELAAASQ

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1789816, Length=292, Percent_Identity=98.6301369863014, Blast_Score=597, Evalue=1e-172,
Organism=Escherichia coli, GI1788643, Length=296, Percent_Identity=64.527027027027, Blast_Score=405, Evalue=1e-114,
Organism=Escherichia coli, GI1788577, Length=295, Percent_Identity=58.3050847457627, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI1786324, Length=279, Percent_Identity=49.1039426523297, Blast_Score=278, Evalue=4e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 33284; Mature: 33153

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRES
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCHHEEECCCCCCCHHHHHH
YSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVLL
HHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LFYHGIESPYPYSLSWLDCFADPKLARQLYASAFPLIDVTVMPDDEIMQHRRMALLELIQ
HHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAERSPKHK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHH
ESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDIMRFTGVSEEELAAASQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCC
>Mature Secondary Structure 
SKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKTLKLESSSFIDDDLRES
CCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHCCHHEEECCCCCCCHHHHHH
YSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAAMQNHLDAGYKTLPMVVLL
HHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LFYHGIESPYPYSLSWLDCFADPKLARQLYASAFPLIDVTVMPDDEIMQHRRMALLELIQ
HHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIRQRDLMGLVEQMACLLSSGYANDRQIKGLFNYILQTGDAVRFNDFIDGVAERSPKHK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCHHH
ESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDIMRFTGVSEEELAAASQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2678009; 9278503 [H]