| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is igaA
Identifier: 218697078
GI number: 218697078
Start: 3860983
End: 3863118
Strand: Direct
Name: igaA
Synonym: EC55989_3803
Alternate gene names: 218697078
Gene position: 3860983-3863118 (Clockwise)
Preceding gene: 218697076
Following gene: 218697079
Centisome position: 74.9
GC content: 52.57
Gene sequence:
>2136_bases ATGAGCACCATTGTGATTTTTTTAGCTGCTTTGCTGGCCTGCTCACTACTTGCGGGATGGCTGATAAAAGTGCGATCCAG ACGGCGTCAGCTGCCCTGGACCAACGCCTTCGCGGATGCGCAAACGCGTAAACTCACACCTGAAGAACGTAGCGCCGTTG AAAATTATCTTGAGAGCCTGACGCAGGTATTACAGGTGCCTGGCCCAACGGGAGCTAGCGCGGCACCGATCTCTCTGGCG CTGAATGCCGAAAGCAACAACGTCATGATGCTGACACACGCTATCACGCGTTACGGCATCTCTACCGACGATCCGAATAA ATGGCGTTACTACCTCGATTCGGTAGAAGTCCACCTGCCCCCTTTCTGGGAACAATACATCAACGATGAGAATACCGTTG AACTGATTTATACCGATTCGCTGCCGCTGGTTATTTCACTCAACGGTCATACGCTGCAGGAGTACATGCAGGAAACGCGC GGCTATGCCTTGCAACCTGTTCCGTCCACGCAGGCGTTGATTCGCGGGGAAGAGAGTGAGCAAATCGAGCTACTCAATAT TCGCAAAGAAACGCATGAAGAATATGCGCTGAGTCGTCCGCGCGGGCTGCGTGAAGCGTTGCTGATCGTCGCCTCCTTCC TGATGTTCTTTTTCTGCCTGATTACCCCGGATGTATTTGTTCCGTGGCTGGCAGGCGGCGCATTACTGCTGCTGGGCGCA GGTCTGTGGGGGCTATTCGCGCCCCCGGCAAAATCCTCCCTGCGAGAAATTCATTGTCTGCGCGGTACACCCCGTCGTTG GGGATTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACT GGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATTGATATCTATCTCGACCGCCACGTAGTGCGTCAGGGG CGATATCTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTC GCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCG CGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGATAGGCGATACATTGCGTATTAGCGGT ACGGGAATGTGTAATATTCGCACTTCCGGAACCTGGAGCGCGAAAACCAATTCACCTTTTTTACCGTTTGACTGCTCGCA GATCATCTGGAATGACGCCCGCTCATTACCATTACCAGAATCTGAACTGGTCAACAAAGCGACGGCATTGACTGAAGCAG TTAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCGATTCAAAAATCCGGC ATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGGATTTATGTTCTGCCAAAGATGACTGTGTGCGACT GAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATG GCGTGAATGTGTTATTACGCCCGGTGAGTGCAGAATCGCTGGATAACCTGGTGGCAACCTCCGCCGCGCCGTTTATCACG CATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGA TTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGG CACAAATGCTGATGCATACGCCGTTTAACGCCGAAGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACGCAGCAT ATTGGCCTTCATCCGATCCCGGATCGTTCCGGCCTGTGGCGCTATCTCAGCACCACATTGCTGCTACTGACGATGCTGGG TAGCGCCATTTACAATGGCGTACAGGCCTGGCGTCGTTACCAGCGTCATCGCACTCGCATGATGGAGATTCAGGCCTATT ATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAA
Upstream 100 bases:
>100_bases TCAAGTTAAACTCCACGCTTGCCGATAGCCAACCGCAGAATCATGTATTGTGTCTGGTGCGACTGACCACGCCTGACAGA CTAAGTAAGATGGGGAAAGC
Downstream 100 bases:
>100_bases CACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTG CCTGGCAGGACGTAGATACC
Product: intracellular growth attenuator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 711; Mature: 710
Protein sequence:
>711_residues MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLA LNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIYTDSLPLVISLNGHTLQEYMQETR GYALQPVPSTQALIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQG RYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRIGDTLRISG TGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSAAPFIT HETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQH IGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE
Sequences:
>Translated_711_residues MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLA LNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIYTDSLPLVISLNGHTLQEYMQETR GYALQPVPSTQALIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQG RYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRIGDTLRISG TGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSAAPFIT HETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQH IGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE >Mature_710_residues STIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLAL NAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIYTDSLPLVISLNGHTLQEYMQETRG YALQPVPSTQALIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGAG LWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQDLGQQTDIDIYLDRHVVRQGR YLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRIGDTLRISGT GMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSGM VLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSAAPFITH ETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHI GLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the igaA family [H]
Homologues:
Organism=Escherichia coli, GI1789801, Length=711, Percent_Identity=99.2967651195499, Blast_Score=1457, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010771 - ProDom: PD147088 [H]
Pfam domain/function: PF07095 IgaA [H]
EC number: NA
Molecular weight: Translated: 79497; Mature: 79366
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP HHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCCCCCCCCCEEEEECEEEECC PFWEQYINDENTVELIYTDSLPLVISLNGHTLQEYMQETRGYALQPVPSTQALIRGEESE CHHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCEECCCCCCHHHHCCCCCC QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHH GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ HHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCEEHHEECCCCCCCCHHHH DLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL HCCCCCCEEEEECHHHHHCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DMPLKFTLSWMKGAQTIEATSVKQLADAGVRIGDTLRISGTGMCNIRTSGTWSAKTNSPF CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCEEEECCCEEEEEECCCCCCCCCCCCC LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR CEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEE PVSAESLDNLVATSAAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHH LLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHCC >Mature Secondary Structure STIVIFLAALLACSLLAGWLIKVRSRRRQLPWTNAFADAQTRKLTPEERSAVENYLESL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHH TQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLP HHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCCCCCCCCCEEEEECEEEECC PFWEQYINDENTVELIYTDSLPLVISLNGHTLQEYMQETRGYALQPVPSTQALIRGEESE CHHHHHCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHCCCEECCCCCCHHHHCCCCCC QIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFFCLITPDVFVPWLAGGALLLLGA CEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHH GLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQEQINNISLGIIDLVYPAHWQPYIAQ HHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCEEHHEECCCCCCCCHHHH DLGQQTDIDIYLDRHVVRQGRYLSLHDEVKNFPLQHWLRSTIIAAGSLLVLFMLLFWIPL HCCCCCCEEEEECHHHHHCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DMPLKFTLSWMKGAQTIEATSVKQLADAGVRIGDTLRISGTGMCNIRTSGTWSAKTNSPF CCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEECCEEEECCCEEEEEECCCCCCCCCCCCC LPFDCSQIIWNDARSLPLPESELVNKATALTEAVNRQLHPKPEDESRVSASLRSAIQKSG CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC MVLLDDFGDIVLKTADLCSAKDDCVRLKNALVNLGNSKDWDALVKRANAGKLDGVNVLLR CEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEE PVSAESLDNLVATSAAPFITHETARAAQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYD CCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC YPPQEQWNAFQKLAQMLMHTPFNAEGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTL CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHH LLLTMLGSAIYNGVQAWRRYQRHRTRMMEIQAYYESCLNPQLITPSESLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]