| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is ygeO [H]
Identifier: 218696452
GI number: 218696452
Start: 3213114
End: 3213695
Strand: Reverse
Name: ygeO [H]
Synonym: EC55989_3136
Alternate gene names: 218696452
Gene position: 3213695-3213114 (Counterclockwise)
Preceding gene: 218696453
Following gene: 218696451
Centisome position: 62.34
GC content: 33.51
Gene sequence:
>582_bases ATGAATCTTGCCCTAAGAAAGATTATATATGATCCAATTAGTTATATTCATCCTCAACGAGTAAGCTTGAATAATACACC TATTAACAATCCGGTGCTTAGATCTATTACCAATGAAATGATTGTTCTGCAGTACAATCTTTCAGTTGAACATTTTAATC TGAATAGTTCACTTATTTACTACATAAACAATTGGAATTTATTTCCATTGTTCTGTTTATTCAGTGGTTATCACTTTTAT CGAGAAAGGTTTGCAGAACGCGGATTTTTTTATAAGGTTCCTGCTGTGCTAAGGGATTATTTATCAGCTATACCGGTGAA AATAAATGAAAAGGCACGATACAAACCCGGCATCGCTAGCTATCACAATATCATCACATGTGGTTTTTCAACGTTGTCAC CCTATATAAGGCAACAACCATTGGCAATGCAGCAACGATTTAATTTATTATTTCCTGATTTTGTTGATCACATACAATTG CCGTTACCACTTGCATCAACTCTTTTAGAGAGAATTACATTTTATGCGAAAAAAAATAGAGATGAGCTTGATAAAATCTC CTGCAAATGGTGTTGTGATTAA
Upstream 100 bases:
>100_bases TGCATTAATATCCGTAGCGACTTGCTGGCTGTTATGGAAGTATAGGGCCATTCTAACTAATTTAGTCAGGTTGAAAATTA AGTAGACATATGAGAGCGTT
Downstream 100 bases:
>100_bases AAGAAAAATTTCTGATGGATTGAAATAAATAGTTTCTCTTAAAGAAAGTATCCTTCTTGAAACCAGCGCTAAAATTCAGA GCATTGAGGTAAAGATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNLALRKIIYDPISYIHPQRVSLNNTPINNPVLRSITNEMIVLQYNLSVEHFNLNSSLIYYINNWNLFPLFCLFSGYHFY RERFAERGFFYKVPAVLRDYLSAIPVKINEKARYKPGIASYHNIITCGFSTLSPYIRQQPLAMQQRFNLLFPDFVDHIQL PLPLASTLLERITFYAKKNRDELDKISCKWCCD
Sequences:
>Translated_193_residues MNLALRKIIYDPISYIHPQRVSLNNTPINNPVLRSITNEMIVLQYNLSVEHFNLNSSLIYYINNWNLFPLFCLFSGYHFY RERFAERGFFYKVPAVLRDYLSAIPVKINEKARYKPGIASYHNIITCGFSTLSPYIRQQPLAMQQRFNLLFPDFVDHIQL PLPLASTLLERITFYAKKNRDELDKISCKWCCD >Mature_193_residues MNLALRKIIYDPISYIHPQRVSLNNTPINNPVLRSITNEMIVLQYNLSVEHFNLNSSLIYYINNWNLFPLFCLFSGYHFY RERFAERGFFYKVPAVLRDYLSAIPVKINEKARYKPGIASYHNIITCGFSTLSPYIRQQPLAMQQRFNLLFPDFVDHIQL PLPLASTLLERITFYAKKNRDELDKISCKWCCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013388 [H]
Pfam domain/function: PF09482 OrgA_MxiK [H]
EC number: NA
Molecular weight: Translated: 22782; Mature: 22782
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLALRKIIYDPISYIHPQRVSLNNTPINNPVLRSITNEMIVLQYNLSVEHFNLNSSLIY CCHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCEEEEEEECEEEEEECCCEEEE YINNWNLFPLFCLFSGYHFYRERFAERGFFYKVPAVLRDYLSAIPVKINEKARYKPGIAS EEECCCHHHHHHHHCCHHHHHHHHHHCCCEEECHHHHHHHHHHCCEEECCCCCCCCCCHH YHNIITCGFSTLSPYIRQQPLAMQQRFNLLFPDFVDHIQLPLPLASTLLERITFYAKKNR HHHHHEECHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCC DELDKISCKWCCD CHHHHCCCEECCC >Mature Secondary Structure MNLALRKIIYDPISYIHPQRVSLNNTPINNPVLRSITNEMIVLQYNLSVEHFNLNSSLIY CCHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCEEEEEEECEEEEEECCCEEEE YINNWNLFPLFCLFSGYHFYRERFAERGFFYKVPAVLRDYLSAIPVKINEKARYKPGIAS EEECCCHHHHHHHHCCHHHHHHHHHHCCCEEECHHHHHHHHHHCCEEECCCCCCCCCCHH YHNIITCGFSTLSPYIRQQPLAMQQRFNLLFPDFVDHIQLPLPLASTLLERITFYAKKNR HHHHHEECHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCC DELDKISCKWCCD CHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]