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The map label for this gene is yqcC

Identifier: 218696391

GI number: 218696391

Start: 3141097

End: 3141426

Strand: Reverse

Name: yqcC

Synonym: EC55989_3071

Alternate gene names: 218696391

Gene position: 3141426-3141097 (Counterclockwise)

Preceding gene: 218696392

Following gene: 218696390

Centisome position: 60.94

GC content: 52.42

Gene sequence:

>330_bases
ATGACCACTCATGACCGCGTTCGTCTCCAGTTGCAGGCGCTTGAAGCGTTACTGCGTGAACATCAGCACTGGCGAAACGA
TGAACCCCAGCCGCATCAATTTAATAGTACCCAACCGTTCTTTATGGACACCATGGAACCACTGGAGTGGTTGCAGTGGG
TGCTGATCCCGCGAATGCACGATTTGTTAGATAACAAACAGCCGTTACCGGGCGCTTTTGCCGTTGCACCCTATTATGAA
ATGGCGCTGGCGACGGACCATCCGCAACGCGCGCTTATTCTGGCTGAGCTGGAAAAACTGGATGCTCTTTTTGCGGATGA
TGCGAGCTAA

Upstream 100 bases:

>100_bases
CTGGAATGCTGCGAAACGAACCGGGAGCGCTGTGAATACAGTGCTCCCTTTTTTTATTCCTGCTATCCTTCGCGGCAGTT
TTTCTTATTGAGGTTGCTTT

Downstream 100 bases:

>100_bases
TGCTGGAAATACTCTATCAGGATGAATGGCTGGTTGCGGTAAATAAACCCTCCGGCTGGCTGGTTCACCGCAGCTGGCTG
GATCGCGACGAGAAAGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYE
MALATDHPQRALILAELEKLDALFADDAS

Sequences:

>Translated_109_residues
MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYE
MALATDHPQRALILAELEKLDALFADDAS
>Mature_108_residues
TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMHDLLDNKQPLPGAFAVAPYYEM
ALATDHPQRALILAELEKLDALFADDAS

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1436

Homologues:

Organism=Escherichia coli, GI1789156, Length=109, Percent_Identity=100, Blast_Score=221, Evalue=8e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQCC_ECOLI (Q46919)

Other databases:

- EMBL:   U29581
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   D65061
- RefSeq:   AP_003358.1
- RefSeq:   NP_417272.1
- PDB:   2HGK
- PDBsum:   2HGK
- ProteinModelPortal:   Q46919
- SMR:   Q46919
- STRING:   Q46919
- EnsemblBacteria:   EBESCT00000003012
- EnsemblBacteria:   EBESCT00000015300
- GeneID:   946027
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW2763
- KEGG:   eco:b2792
- EchoBASE:   EB2964
- EcoGene:   EG13172
- eggNOG:   COG3098
- GeneTree:   EBGT00050000011547
- HOGENOM:   HBG742121
- OMA:   STQPFCM
- ProtClustDB:   CLSK880492
- BioCyc:   EcoCyc:G7450-MONOMER
- Genevestigator:   Q46919
- InterPro:   IPR007384
- PIRSF:   PIRSF006257

Pfam domain/function: PF04287 DUF446

EC number: NA

Molecular weight: Translated: 12787; Mature: 12655

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS
HHHCCCCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDTMEPLEWLQWVLIPRMH
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
DLLDNKQPLPGAFAVAPYYEMALATDHPQRALILAELEKLDALFADDAS
HHHCCCCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503