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The map label for this gene is ygaM

Identifier: 218696269

GI number: 218696269

Start: 3010822

End: 3011163

Strand: Direct

Name: ygaM

Synonym: EC55989_2940

Alternate gene names: 218696269

Gene position: 3010822-3011163 (Clockwise)

Preceding gene: 218696267

Following gene: 218696270

Centisome position: 58.41

GC content: 53.22

Gene sequence:

>342_bases
ATGGGGGATCATATGTTTAACCGACCGAACCGCAACGACGTTGATGATGGCGTGCAGGATATCCAGAATGATGTCAATCA
ATTAGCTGACAGCCTCGAATCTGTATTAAAGTCCTGGGGCAGCGACGCCAAAGGGGAAGCTGAAGCCGCACGCAGTAAAG
CTCAGGCATTGCTGAAAGAAACCAGGGCGCGAATGCATGGTCGTACTCGCGTCCAGCAAGCCGCACGCGATGCCGTTGGC
TGCGCGGATTCTTTTGTTCGTGAAAGACCCTGGTGTAGCGTGGGTACAGCAGCTGCGGTAGGTATTTTTATCGGCGCACT
GTTAAGCATGCGCAAATCGTAG

Upstream 100 bases:

>100_bases
CTGATTGCGCATTCACAACGCTTTCAGAAAAGTCCATAAAGCCGCGATGAACCTCAGTTAAGAAAATTATGGTCTACACT
GAAAATTACATCGAATTCTA

Downstream 100 bases:

>100_bases
TGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAA
TTCCCCTACCCCGTCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVG
CADSFVRERPWCSVGTAAAVGIFIGALLSMRKS

Sequences:

>Translated_113_residues
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVG
CADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
>Mature_112_residues
GDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKETRARMHGRTRVQQAARDAVGC
ADSFVRERPWCSVGTAAAVGIFIGALLSMRKS

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli elaB and yqjD

Homologues:

Organism=Escherichia coli, GI1789027, Length=113, Percent_Identity=100, Blast_Score=231, Evalue=8e-63,
Organism=Escherichia coli, GI1789485, Length=96, Percent_Identity=40.625, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGAM_ECO57 (P0ADQ9)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E91070
- PIR:   H85914
- RefSeq:   NP_289222.1
- RefSeq:   NP_311560.2
- ProteinModelPortal:   P0ADQ9
- EnsemblBacteria:   EBESCT00000026864
- EnsemblBacteria:   EBESCT00000059920
- GeneID:   914751
- GeneID:   958113
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z3972
- KEGG:   ecs:ECs3533
- GeneTree:   EBGT00050000010837
- HOGENOM:   HBG648388
- OMA:   MEDHMLN
- ProtClustDB:   PRK10132
- BioCyc:   ECOL83334:ECS3533-MONOMER
- InterPro:   IPR010279

Pfam domain/function: PF05957 DUF883

EC number: NA

Molecular weight: Translated: 12288; Mature: 12157

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GDHMFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAEAARSKAQALLKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
TRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGALLSMRKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796