| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yfjF
Identifier: 218696241
GI number: 218696241
Start: 2977145
End: 2977435
Strand: Reverse
Name: yfjF
Synonym: EC55989_2906
Alternate gene names: 218696241
Gene position: 2977435-2977145 (Counterclockwise)
Preceding gene: 218696242
Following gene: 218696237
Centisome position: 57.76
GC content: 51.2
Gene sequence:
>291_bases GTGCCAGGTAAAATTGCCGTTGAGGTGGCTTATGCGCTACCTGAGAAGCAGTACCTGCAGCGCGTGACGCTGCAGGAGGG CGCGACGGTTGAAGAAGCTATTCGCGCCAGTGGCTTGCTGGAATTGCGTACCGATATCGATTTAACTAAAAACAAAGTCG GCATTTACAGCCGTCCGGCAAAACTAAGCGATAGTGTGCATGATGGCGATCGGGTGGAGATTTATCGCCCTCTCATTGCC GATCCGAAAGAGCTTCGCAGGCAACGAGCAGAAAAATCAGCGAATAAATAA
Upstream 100 bases:
>100_bases TTTACCAATAAGTTGATTGAACTCGCCTTTGGTCGCGTGTTTAAAGAGCTGGCGTCTAATATGGTCCAGGCTTTTACGGT TCGTGCGAAAGAGGTTTACA
Downstream 100 bases:
>100_bases CAGACAGAAAAAAGGTGCTCATTGAGCACCTTTTTTAACGTCTTTGAGAGCAACTTTATTATTAGTTACCACTCAGCGCA GGTTTGTTATCAATATTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIA DPKELRRQRAEKSANK
Sequences:
>Translated_96_residues MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIA DPKELRRQRAEKSANK >Mature_95_residues PGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIAD PKELRRQRAEKSANK
Specific function: Unknown
COG id: COG2914
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0125 (rnfH) family [H]
Homologues:
Organism=Escherichia coli, GI87082139, Length=96, Percent_Identity=100, Blast_Score=193, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005346 [H]
Pfam domain/function: PF03658 UPF0125 [H]
EC number: NA
Molecular weight: Translated: 10789; Mature: 10658
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPA CCCCEEEEHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC KLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTKNKVGIYSRPA CCCEEEEHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC KLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA