| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yfiP
Identifier: 218696212
GI number: 218696212
Start: 2942459
End: 2943157
Strand: Direct
Name: yfiP
Synonym: EC55989_2873
Alternate gene names: 218696212
Gene position: 2942459-2943157 (Clockwise)
Preceding gene: 218696211
Following gene: 218696213
Centisome position: 57.08
GC content: 52.22
Gene sequence:
>699_bases ATGACCGAAAACGCTGTTCTCCAGTTACGCGCCGAGCGTATTGCGCGCGCAACACGTCCTTTTCTTGCCCGCGGTAATCG CGTTCGTCGCTGCCAACGCTGTCTTTTGCCAGAGAAATTATGTCTCTGTTCGACAATTACCCCAGCACAAGCAAAAAGTC GCTTCTGTTTGCTGATGTTCGACACCGAGCCAATGAAGCCCAGTAATACCGGGCGTCTGATTGCTGATATTTTGCCTGAT ACCGTTGCGTTTCAATGGTCGCGTACCGAACCCTCGCAGGATTTGCTGGATCTGGTACAAAACCCGGATTATCAGCCAAT GGTGGTCTTTCCCGCCTCGTATGCTGATGAGCAACGGGAAGTGATCTTCACACCACCTGCCGGTAAGCCACCGCTGTTTA TCATGCTCGATGGTACCTGGCCGGAAGCTCGCAAGATGTTTCGTAAAAGTCCGTATCTGGATAATCTTCCCGTCATTTCC GTCGATCTTTCCCGGCTTTCTGCCTATCGCCTGCGTGAAGCCCAGGCTGCAGGCCAATATTGTACTGCCGAGGTAGCCAT CGCACTGTTAGATATGGCCGGCGATACCGGGGCGGCAGCAGGGTTAGGCGAGCATTTTACCCGCTTTAAAACACGCTATC TGGCAGGAAAAACGCAACATCTGGGTAGCATCACAGCAGAACAGTTAGAAAGCGTTTAA
Upstream 100 bases:
>100_bases CGTTCGATAGCTGGCTGAACGAATCTCTTTAATCTTACCGGGGCGCATCTTGTGCCCCGTTTTCTCCTCTGCGACAATGG CGTTTTTTCGACGCTCTCTT
Downstream 100 bases:
>100_bases AATCATTCGGTCACTTCTGCGGGAGACCGGTATGAGTCAGCGAGGACTGGAAGCACTACTGCGACCAAAATCGATAGCGG TAATTGGCGCGTCGATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPD TVAFQWSRTEPSQDLLDLVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS VDLSRLSAYRLREAQAAGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV
Sequences:
>Translated_232_residues MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPD TVAFQWSRTEPSQDLLDLVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS VDLSRLSAYRLREAQAAGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV >Mature_231_residues TENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDT VAFQWSRTEPSQDLLDLVQNPDYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISV DLSRLSAYRLREAQAAGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DTW family [H]
Homologues:
Organism=Escherichia coli, GI87082133, Length=232, Percent_Identity=99.1379310344828, Blast_Score=475, Evalue=1e-136,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005636 [H]
Pfam domain/function: PF03942 DTW [H]
EC number: NA
Molecular weight: Translated: 25923; Mature: 25792
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMF CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEE DTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNPDYQPMVVFPASYADEQRE CCCCCCCCCCCCCHHHHCCCHHEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCC VIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAAGQY EEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCH CTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TENAVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCSTITPAQAKSRFCLLMF CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEE DTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNPDYQPMVVFPASYADEQRE CCCCCCCCCCCCCHHHHCCCHHEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCC VIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVISVDLSRLSAYRLREAQAAGQY EEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCH CTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKTQHLGSITAEQLESV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]