| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yfiK
Identifier: 218696206
GI number: 218696206
Start: 2938660
End: 2939247
Strand: Direct
Name: yfiK
Synonym: EC55989_2867
Alternate gene names: 218696206
Gene position: 2938660-2939247 (Clockwise)
Preceding gene: 218696204
Following gene: 218696208
Centisome position: 57.01
GC content: 51.53
Gene sequence:
>588_bases GTGACACCGACCCTTTTAAGTGCTTTTTGGACTTACACCCTGATTACCGCCATGACGCCAGGACCGAACAATATTCTCGC CCTTAGCTCTGCTACGTCGCATGGATTTCGTCAAAGTACCCGCGTGCTGGCAGGGATGAGTCTGGGATTTTTGATTGTGA TGTTACTGTGTGCGGGCATTTCATTTTCACTGGCAGTGATTGACCCGGCAGCGGTACACCTTTTGAGTTGGGCGGGGGCG GCATATATTGTCTGGCTGGCGTGGAAAATCGCCACCAGCCCAACAAAGGAAGACGGACTTCAGGCAAAACCAATCAGCTT TTGGGCCAGCTTTGCTTTGCAGTTTGTGAACGTCAAAATCATTTTGTACGGTGTTACGGCACTGTCGACGTTTGTTCTGC CGCAAACACAGGCGCTAAGCTGGGTAGTTGGCGTCAGCGTTTTGCTGGCGATGATTGGGACGTTTGGTAATGTGTGCTGG GCGCTGGCGGGGCATCTGTTTCAGCGATTGTTTCGCCAGTATGGTCGCCAGTTAAATATCGTGCTCGCGCTGCTGCTGAT CTATTGCGCGGTACGCATTTTCTATTAA
Upstream 100 bases:
>100_bases CCCCAAACCTATCGAAAATATCGAATTTAGAATGTAAAAACATTCATTTTTTTAAATGTTCCGTGTCGGGTACTGTCTAC CAAAACAGAGGAGATAACAA
Downstream 100 bases:
>100_bases TTAAAAAAGCGGAAGAGGTCGCCCTCTTCCGCTTAGTAACTTGCTACTTAAGCCTTACAGGCTTTCAGTAAAGGTACGAG CGATAACGTCGCGCTGCTGT
Product: neutral amino-acid efflux protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGA AYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW ALAGHLFQRLFRQYGRQLNIVLALLLIYCAVRIFY
Sequences:
>Translated_195_residues MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGA AYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW ALAGHLFQRLFRQYGRQLNIVLALLLIYCAVRIFY >Mature_194_residues TPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAA YIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWA LAGHLFQRLFRQYGRQLNIVLALLLIYCAVRIFY
Specific function: Exporter of O-acetylserine (OAS) and cysteine
COG id: COG1280
COG function: function code E; Putative threonine efflux protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the rht family
Homologues:
Organism=Escherichia coli, GI1788932, Length=195, Percent_Identity=99.4871794871795, Blast_Score=388, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): EAMB_ECO24 (A7ZQ23)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001463902.1 - STRING: A7ZQ23 - EnsemblBacteria: EBESCT00000020350 - GeneID: 5589675 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_2865 - eggNOG: COG1280 - GeneTree: EBGT00050000008904 - HOGENOM: HBG759042 - OMA: VGIFLQF - ProtClustDB: PRK10323 - BioCyc: ECOL331111:ECE24377A_2865-MONOMER - InterPro: IPR001123
Pfam domain/function: PF01810 LysE
EC number: NA
Molecular weight: Translated: 21263; Mature: 21131
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1b18f80c)-; HASH(0x1bb19a18)-; HASH(0x1bcfb2c4)-; HASH(0x1af56b3c)-; HASH(0x1bb68480)-; HASH(0x1b3bd770)-;
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGI CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKI CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNI HEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH VLALLLIYCAVRIFY HHHHHHHHHHHHHCH >Mature Secondary Structure TPTLLSAFWTYTLITAMTPGPNNILALSSATSHGFRQSTRVLAGMSLGFLIVMLLCAGI CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC SFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQAKPISFWASFALQFVNVKI CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCWALAGHLFQRLFRQYGRQLNI HEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH VLALLLIYCAVRIFY HHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA