| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is yfgL
Identifier: 218696139
GI number: 218696139
Start: 2861334
End: 2862512
Strand: Reverse
Name: yfgL
Synonym: EC55989_2797
Alternate gene names: 218696139
Gene position: 2862512-2861334 (Counterclockwise)
Preceding gene: 218696140
Following gene: 218696138
Centisome position: 55.53
GC content: 53.27
Gene sequence:
>1179_bases ATGCAATTGCGTAAATTACTGCTGCCAGGACTGCTTTCCGTTACCCTTTTAAGCGGCTGTTCGCTGTTTAACAGCGAAGA AGATGTGGTAAAGATGTCCCCATTGCCAACCGTTGAAAACCAGTTTACGCCGACCACGGCGTGGAGCACTTCCGTTGGTA GCGGCATTGGCAACTTCTATTCCAATCTTCATCCGGCACTGGCGGACAACGTTGTCTATGCAGCGGACCGCGCTGGTTTG GTAAAAGCGCTGAATGCGGATGATGGCAAAGAAATCTGGTCTGTCAGCCTGGCCGAGAAAGATGGCTGGTTCTCTAAAGA GCCTGCATTACTTTCTGGCGGTCTGACCGTGTCTGGTGGGCATGTCTACATTGGCAGCGAAAAGGCGCAGGTTTACGCGC TGAATACCAGCGATGGTACTGTGGCATGGCAAACTAAAGTCGCGGGTGAAGCACTTTCGCGCCCGGTGGTCAGCGACGGT CTGGTGTTAATCCACACCAGTAACGGTCAGTTACAAGCGCTGAACGAGGCTGACGGCGCTGTCAAATGGACAGTTAACCT CGATATGCCTTCGCTCTCTTTGCGTGGCGAGTCTGCGCCGGCAACGGCTTTTGGTGCGGCCGTCGTGGGTGGCGATAATG GTCGCGTCAGCGCAGTGCTGATGGAACAGGGCCAGATGATTTGGCAGCAGCGTATTTCCCAGGCGACCGGTTCTACCGAA ATTGACCGTCTGAGCGATGTTGACACGACTCCCGTCGTTGTTAACGGCGTTGTTTTCGCGCTGGCCTATAATGGTAACCT GACGGCGCTTGATCTGCGCAGTGGTCAGATTATGTGGAAACGCGAACTGGGTTCGGTGAATGATTTCATCGTCGACGGCA ATCGCATCTATCTGGTCGATCAAAATGACCGGGTGATGGCGTTGACCATTGATGGCGGCGTTACGCTGTGGACACAAAGC GATCTGTTGCATCGCCTGCTGACTTCTCCGGTGCTGTATAATGGCAACCTGGTGGTAGGTGACAGTGAAGGTTATCTGCA CTGGATTAACGTCGAAGATGGTCGTTTCGTTGCCCAGCAAAAAGTTGATAGTTCCGGTTTCCAGACTGAACCGGTTGCCG CTGACGGCAAACTGCTGATCCAGGCAAAAGACGGAACCGTGTACTCTATTACACGTTAA
Upstream 100 bases:
>100_bases CGTAGTGCATGGGAAGCAGGCGTGAAAAGCGATGTTACTCCGGCACTGAGCGAAATGATGCAGATGAAAATTAATAATTT GTCCATCTGAGAGGGACCCG
Downstream 100 bases:
>100_bases TCGTCTCTGTCGTTCACTTTGAAAACGGCTCCTGGACAGGGGCCGTTTTCCTGTTTTTAACAACGACGCGAATATAGCGT GCGTTGTCTGATGATTTATA
Product: outer membrane protein assembly complex subunit YfgL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGL VKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGLTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQS DLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
Sequences:
>Translated_392_residues MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGL VKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGLTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQS DLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR >Mature_392_residues MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGL VKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGLTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQS DLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]
COG id: COG1520
COG function: function code S; FOG: WD40-like repeat
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To R.prowazekii RP232 [H]
Homologues:
Organism=Escherichia coli, GI1788859, Length=392, Percent_Identity=99.4897959183673, Blast_Score=788, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017687 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 [H]
Pfam domain/function: PF01011 PQQ [H]
EC number: NA
Molecular weight: Translated: 41872; Mature: 41872
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFY CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH SNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGLTVSGG HHCCCHHHCCEEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEECCEEEECC HVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGA EEEECCCCEEEEEEECCCCEEEEEEECCHHHHCCCCCCCCEEEEECCCCCEEEECCCCCE VKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE EEEEEEECCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCC IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVD HHHHCCCCCCCEEECEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEEECCEEEEEE QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQ CCCCEEEEEECCCEEEEEHHHHHHHHHCCCEEECCEEEEECCCCEEEEEEECCCCEEEEE KVDSSGFQTEPVAADGKLLIQAKDGTVYSITR CCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC >Mature Secondary Structure MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPTTAWSTSVGSGIGNFY CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH SNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGLTVSGG HHCCCHHHCCEEEEECCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCEEECCEEEECC HVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGA EEEECCCCEEEEEEECCCCEEEEEEECCHHHHCCCCCCCCEEEEECCCCCEEEECCCCCE VKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTE EEEEEEECCCCEEECCCCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCC IDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVD HHHHCCCCCCCEEECEEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEEECCEEEEEE QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQ CCCCEEEEEECCCEEEEEHHHHHHHHHCCCEEECCEEEEECCCCEEEEEEECCCCEEEEE KVDSSGFQTEPVAADGKLLIQAKDGTVYSITR CCCCCCCCCCCCCCCCEEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]