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The map label for this gene is 218696104

Identifier: 218696104

GI number: 218696104

Start: 2820345

End: 2820611

Strand: Reverse

Name: 218696104

Synonym: EC55989_2758

Alternate gene names: NA

Gene position: 2820611-2820345 (Counterclockwise)

Preceding gene: 218696105

Following gene: 218696103

Centisome position: 54.72

GC content: 44.94

Gene sequence:

>267_bases
ATGTATATACATGACGTATATCCCAAAAAAGGGGGGGCTATGGAAACTACTGTATTTTTAAGTAATCGCAGTCAGGCCGT
CAGATTACCGAAAGCGGTCGCTCTGCCAGAGGATGTTAAGAAAGTAGAAATTATTGCGATTGGTCGTACAAGAATCATCA
CTCCCGCCGGTGAGTCCTGGGACAGTTGGTTTGATGGCGAAAATGTGAGTGCGGATTTTATGGATATCCGTGATCAACCC
GCAATGCAGGAAAGGGAATCATTCTGA

Upstream 100 bases:

>100_bases
GTTTATTTAGCCGGAGGGTACTCCGGCTAAATGTCTTCGATACCCCCGCTACAATACTTCGCATTATCTCCCTTTGACAG
GAAAGTAATAACAGGCCAAT

Downstream 100 bases:

>100_bases
TGCTGAAATTCATGCTGGATACCAATATCTGTATTTTCACTATTAAGAATAAACCAGTACATGTCAGAGAGCGGTTTAAC
CTGAATTCTGGCCGGATGTG

Product: conserved hypothetical protein, putative transcriptionnal regulation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MYIHDVYPKKGGAMETTVFLSNRSQAVRLPKAVALPEDVKKVEIIAIGRTRIITPAGESWDSWFDGENVSADFMDIRDQP
AMQERESF

Sequences:

>Translated_88_residues
MYIHDVYPKKGGAMETTVFLSNRSQAVRLPKAVALPEDVKKVEIIAIGRTRIITPAGESWDSWFDGENVSADFMDIRDQP
AMQERESF
>Mature_88_residues
MYIHDVYPKKGGAMETTVFLSNRSQAVRLPKAVALPEDVKKVEIIAIGRTRIITPAGESWDSWFDGENVSADFMDIRDQP
AMQERESF

Specific function: Unknown

COG id: COG4456

COG function: function code S; Virulence-associated protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the vapB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 9959; Mature: 9959

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIHDVYPKKGGAMETTVFLSNRSQAVRLPKAVALPEDVKKVEIIAIGRTRIITPAGESW
CCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCEEEECCCCCCC
DSWFDGENVSADFMDIRDQPAMQERESF
CCCCCCCCCCCCEECCCCCCCCCHHCCC
>Mature Secondary Structure
MYIHDVYPKKGGAMETTVFLSNRSQAVRLPKAVALPEDVKKVEIIAIGRTRIITPAGESW
CCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCEEEEEEECCEEEECCCCCCC
DSWFDGENVSADFMDIRDQPAMQERESF
CCCCCCCCCCCCEECCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9171415; 12384590 [H]