| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218695953
Identifier: 218695953
GI number: 218695953
Start: 2672299
End: 2673009
Strand: Reverse
Name: 218695953
Synonym: EC55989_2598
Alternate gene names: NA
Gene position: 2673009-2672299 (Counterclockwise)
Preceding gene: 218695954
Following gene: 218695952
Centisome position: 51.85
GC content: 43.46
Gene sequence:
>711_bases ATGCCCAGTAAAAATAGTGAAGCCCGGCAGTGCGTGAACACAAACCGGGCCTCTATGTCAGTAACCGTATGCAAGGAAAC TAACATGAATATTGTAGCAAAATCAGATTACAACTTCCACGGAGTTGAATTGGTGCCCACCCGTGATATGCATGGTGTTT GGTTTACATCATCTAATATTGCATCTGCACTTAAATACGCAAATAGTCGTGCAGTAACAATGATTTATAACAAGTATAGC GATGAGTTTAGCGCCGGAATGACTCAGGTACTCGAAGTGAGTACCTCAGGAAATTATCGTAAAAAAGTGCGTGTTTTCTC ACTACGCGGTGCCCACCTAATCGCGATGTTTGCTCGCACTCAGGTAGCCAAAGAGTTCCGCCGCTGGGTGCTGGATATTT TGGATCGGCAGGCAGAATGCTCACCGATTGCAAAACAGTTTACTGACGAAGAACTGGTTAATCTCTGCTACTTACAATTG TGGATGGAGAAGAGTCAACAAATGTGCAAACACATCTACCCAGGAATGAAGCAAATTGGTTCTGAGCTTTCAGGAAGGAT TTACGATATTGCATATGAGACTCGCTACATGTCAGAAGAAACCAAGAAATCACTTCTTCGTGAAATGAAGAATCTTGATA CCAACAATTTTGTCGTAAAGAACGCTCAGCCAATGCTGGCAAAACTGCGCGGCGAGGAATGGATTCATTGA
Upstream 100 bases:
>100_bases ATGAAGGAGGAGATTAGACGTGTTGCTGAAATGGATGGAATTTCTATCAACTCTGCGATTGTGCAGCGACTGGCTAAAAG CCTGAGAGAGGAAAGAGCTA
Downstream 100 bases:
>100_bases TTGGTGCGCCGGACGGCGCAAAAAGAAAACCGCCAGTGTGCTGCTGGCGGCCTATGTCACACCCTTACTACCACATAAGG AATGCCTAATGACTTTTAAG
Product: hypothetical protein from phage
Products: NA
Alternate protein names: Prophage Antirepressor-Like Protein; Phage Protein; BRO Family Domain-Containing Protein; BRO Domain-Containing Protein; Bacteriophage Protein; Phage-Related Protein; APSE-2 Prophage
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MPSKNSEARQCVNTNRASMSVTVCKETNMNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYS DEFSAGMTQVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTQVAKEFRRWVLDILDRQAECSPIAKQFTDEELVNLCYLQL WMEKSQQMCKHIYPGMKQIGSELSGRIYDIAYETRYMSEETKKSLLREMKNLDTNNFVVKNAQPMLAKLRGEEWIH
Sequences:
>Translated_236_residues MPSKNSEARQCVNTNRASMSVTVCKETNMNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYS DEFSAGMTQVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTQVAKEFRRWVLDILDRQAECSPIAKQFTDEELVNLCYLQL WMEKSQQMCKHIYPGMKQIGSELSGRIYDIAYETRYMSEETKKSLLREMKNLDTNNFVVKNAQPMLAKLRGEEWIH >Mature_235_residues PSKNSEARQCVNTNRASMSVTVCKETNMNIVAKSDYNFHGVELVPTRDMHGVWFTSSNIASALKYANSRAVTMIYNKYSD EFSAGMTQVLEVSTSGNYRKKVRVFSLRGAHLIAMFARTQVAKEFRRWVLDILDRQAECSPIAKQFTDEELVNLCYLQLW MEKSQQMCKHIYPGMKQIGSELSGRIYDIAYETRYMSEETKKSLLREMKNLDTNNFVVKNAQPMLAKLRGEEWIH
Specific function: Unknown
COG id: COG3561
COG function: function code K; Phage anti-repressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27227; Mature: 27095
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKNSEARQCVNTNRASMSVTVCKETNMNIVAKSDYNFHGVELVPTRDMHGVWFTSSNI CCCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCEEEEECHHH ASALKYANSRAVTMIYNKYSDEFSAGMTQVLEVSTSGNYRKKVRVFSLRGAHLIAMFART HHHHHHCCCCEEEEEEEHHCHHHHHHHHHHEEECCCCCCCCEEEEEEECCHHHHHHHHHH QVAKEFRRWVLDILDRQAECSPIAKQFTDEELVNLCYLQLWMEKSQQMCKHIYPGMKQIG HHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SELSGRIYDIAYETRYMSEETKKSLLREMKNLDTNNFVVKNAQPMLAKLRGEEWIH HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCC >Mature Secondary Structure PSKNSEARQCVNTNRASMSVTVCKETNMNIVAKSDYNFHGVELVPTRDMHGVWFTSSNI CCCCHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCEEEEECHHH ASALKYANSRAVTMIYNKYSDEFSAGMTQVLEVSTSGNYRKKVRVFSLRGAHLIAMFART HHHHHHCCCCEEEEEEEHHCHHHHHHHHHHEEECCCCCCCCEEEEEEECCHHHHHHHHHH QVAKEFRRWVLDILDRQAECSPIAKQFTDEELVNLCYLQLWMEKSQQMCKHIYPGMKQIG HHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SELSGRIYDIAYETRYMSEETKKSLLREMKNLDTNNFVVKNAQPMLAKLRGEEWIH HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA