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The map label for this gene is amsF [H]

Identifier: 218695950

GI number: 218695950

Start: 2668877

End: 2670856

Strand: Reverse

Name: amsF [H]

Synonym: EC55989_2595

Alternate gene names: 218695950

Gene position: 2670856-2668877 (Counterclockwise)

Preceding gene: 218695952

Following gene: 218695946

Centisome position: 51.81

GC content: 40.61

Gene sequence:

>1980_bases
ATGACAGACATTACAGCCAATGTGATCGTATCGATGCCTTCGCAACTCTTCACTATGGCTCGTTCTTTTAAAGCCGTAGC
CAATGGCAAAATTTATATCGGAAAAATTGACACTGACCCGGTAAATCCTGAAAACCAGATTCAGGTTTATGTGGAAAACG
AAGACGGTTCTCACGTTCCTGTTTCGCAACCAATCATCATTAACGCTGCTGGATATCCGGTATATAACGGACAGATTGCT
AAGTTCGTAACTGTGCAAGGCCATTCTATGGCTATTTATGATGCGTACGGTGTGCAGCAGTTCTATTTTCCTAATGTTCT
GAAGTATGATCCTGATCAGCTACGGCAAGAATTACAGGGGAGCGCAGGAGCCATTATCGTTGGTGGTGCTATTCTCGAAT
GCTCATCCGTTGAACAGGCCCAATCAATATTAGGGTTAACAGATGGGAAAAAGGTTAGAACTTATTATTATAATGTTCCA
GTTGTAACAGATTGGGTGTTTACAACTGAAAAACCACAGTCACCTATATTTTATATTTCTGCAGTTGGCGGGTATCTTAT
TTTAATGACGCCTAATTTCGCTTCCGCTGGCATTATTGAAGGTGAATATGTTCCGCTAAACGCTGCGCATAACCGTAATG
TAATTCAAAAACTGGTAAGAGACACAAGATTCAGTAAATTTGAATATGGTGCAACAGGTACTTTTTATGTTCTTGGCTCT
ATTCATCCCTTACGAGATAATATAGAAATACACCACGAAGCTGGGGTTACAGTTATGGGGCGTTACGATGACCCCACGGT
AGGGCCAGAAATTATGGGGTTAAACTCCGGGGGGATGTGGTCCTTTGCACATTTTCTTAACCCTGATGCAACGGTTTGGG
ATGACAATAACTACACAATTACAGCTGTTATGAAAAATGTTACCTACATTCTTAACGGCAAGATAGGTACAGAATATAAC
TCCATTCATTCTAAACCGCACAACAACAACCCTATTGGTTTCTTTACTTGTGAAAACTGTAGCGTTGTCGGCTCTGGCGG
GGTTATTGGATCTGACCACCGCGGCATTAACGTAGATGGCGCAGGAGATAATTGCCGTATAGATATTGGGTACGTCACGG
GAACCAGCAACAACCCGCTTCAAATGAAAATAAACGCCGAACGCTACGCTTTTGTTAAAGTTGGTGCTGTTTATGGGGTT
AAGTTTGACGGAGGACAAACAAATGCTGTTGTATGGTGCAGTGGTGGACGAATTGATGTTGAAGTTGGTAATTATAGATG
GGATGGGGTGAATAAACCAATCCTTGCTTACGGCAACAATTGCCAGGAAATCACTTTAAAGGCAGGTATTATCTCTGGTG
TTTCGCAATTGATGCGTCAGTATAACACCCCTGTGGCTAGAGTGCTGTCTGCGTGGGTAAACAATACAGACTCTCTCATA
AACAAAGCGGAAGACACTGACAGGGCTGGTGTGACTAAGATTTCTGAGATACGGGGTGTTAACGCAGATGACGCAGTACT
TACCAGCGCATTCTATGATGAAACTAAACTATCAACTCAAGAGGTGGTTATCATATGTGATAATAATTTTAAAAAAGCAA
GTAGTTCATTTGTTTATTTTAAAGGAAAAACATCATCAGGCGCAATAACATCATGGTACTCGCAAAATAATATAGACCCA
TCTAACATAACTGATTTTTCTGATTGGAATATAAAAATAGGACAAAGTGGATTATTATCCATATCTGGATTATCATTTTC
ATATAAAATAAATAGAAGGTTTCAGTTTTTATCTGTTCAGTTTGTTGATAGCGGAGGTACAGAACGAGTCATAACTATAC
CAATAGTTATGACACTGGCAACAACGACAACTGTTAGTTACATTGCAGGAACTAGCAACTTAAGTGTGACTAGAGTGGGA
GATACGTTATCTGCAGTATTAAGCGCAGGTAGCTTGCGCTTTGCTAAGGAGCACAATTAA

Upstream 100 bases:

>100_bases
TAAAACCTACTGTACAAATCAACAATCGTACCATTTCGGTATGCAACAAACATCAACCGTAGCCATGCTTCGGTGATTCC
TTGTATCTGGAGCAAATTAA

Downstream 100 bases:

>100_bases
ATATTTCAATGAAAATATGAACCTCTCATAAATTAAGAGGTTCATATTACCAATAAAAATTATAACTCAATTAATCTTCA
AGTGGGTTTTTATTATCTTG

Product: hypothetical protein; putative head-binding domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MTDITANVIVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIA
KFVTVQGHSMAIYDAYGVQQFYFPNVLKYDPDQLRQELQGSAGAIIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVP
VVTDWVFTTEKPQSPIFYISAVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGS
IHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWDDNNYTITAVMKNVTYILNGKIGTEYN
SIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDGAGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGV
KFDGGQTNAVVWCSGGRIDVEVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLI
NKAEDTDRAGVTKISEIRGVNADDAVLTSAFYDETKLSTQEVVIICDNNFKKASSSFVYFKGKTSSGAITSWYSQNNIDP
SNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQFVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVG
DTLSAVLSAGSLRFAKEHN

Sequences:

>Translated_659_residues
MTDITANVIVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIA
KFVTVQGHSMAIYDAYGVQQFYFPNVLKYDPDQLRQELQGSAGAIIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVP
VVTDWVFTTEKPQSPIFYISAVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGS
IHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWDDNNYTITAVMKNVTYILNGKIGTEYN
SIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDGAGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGV
KFDGGQTNAVVWCSGGRIDVEVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLI
NKAEDTDRAGVTKISEIRGVNADDAVLTSAFYDETKLSTQEVVIICDNNFKKASSSFVYFKGKTSSGAITSWYSQNNIDP
SNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQFVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVG
DTLSAVLSAGSLRFAKEHN
>Mature_658_residues
TDITANVIVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAK
FVTVQGHSMAIYDAYGVQQFYFPNVLKYDPDQLRQELQGSAGAIIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVPV
VTDWVFTTEKPQSPIFYISAVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGSI
HPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWDDNNYTITAVMKNVTYILNGKIGTEYNS
IHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDGAGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGVK
FDGGQTNAVVWCSGGRIDVEVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLIN
KAEDTDRAGVTKISEIRGVNADDAVLTSAFYDETKLSTQEVVIICDNNFKKASSSFVYFKGKTSSGAITSWYSQNNIDPS
NITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQFVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVGD
TLSAVLSAGSLRFAKEHN

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May be involved in the polymerization or late modification of the repeating units [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.meliloti exoP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012334
- InterPro:   IPR011050
- InterPro:   IPR009093 [H]

Pfam domain/function: PF09008 Head_binding [H]

EC number: NA

Molecular weight: Translated: 71813; Mature: 71681

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDITANVIVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVP
CCCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCC
VSQPIIINAAGYPVYNGQIAKFVTVQGHSMAIYDAYGVQQFYFPNVLKYDPDQLRQELQG
CCCCEEEEECCCEEECCCEEEEEEECCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHCC
SAGAIIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVPVVTDWVFTTEKPQSPIFYIS
CCCEEEECCEEEEECCHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEECCCCCCCEEEEE
AVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGS
ECCCEEEEECCCCCCCCEECCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCEEEEEEEC
IHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWDDNNYTI
CEECCCCEEEEECCCEEEEECCCCCCCCCEEEEECCCCCEEEHHHCCCCCEEEECCCEEE
TAVMKNVTYILNGKIGTEYNSIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDG
EEEEECEEEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCEEEECCCEECCCCCCEEECC
AGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGVKFDGGQTNAVVWCSGGRIDV
CCCCEEEEEEEEECCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCEEEEECCCEEEE
EVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLI
EECCEEECCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
NKAEDTDRAGVTKISEIRGVNADDAVLTSAFYDETKLSTQEVVIICDNNFKKASSSFVYF
HCCCCCCCCCCEEHHHHCCCCCCHHHEEHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEE
KGKTSSGAITSWYSQNNIDPSNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQ
ECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEEEEECCEEEEEEEE
FVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVGDTLSAVLSAGSLRFAKEHN
EECCCCCCEEEEEEEEEEEHHHHEEEEEECCCCEEEEECCHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure 
TDITANVIVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVP
CCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCC
VSQPIIINAAGYPVYNGQIAKFVTVQGHSMAIYDAYGVQQFYFPNVLKYDPDQLRQELQG
CCCCEEEEECCCEEECCCEEEEEEECCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHCC
SAGAIIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVPVVTDWVFTTEKPQSPIFYIS
CCCEEEECCEEEEECCHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEECCCCCCCEEEEE
AVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGS
ECCCEEEEECCCCCCCCEECCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCEEEEEEEC
IHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWDDNNYTI
CEECCCCEEEEECCCEEEEECCCCCCCCCEEEEECCCCCEEEHHHCCCCCEEEECCCEEE
TAVMKNVTYILNGKIGTEYNSIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDG
EEEEECEEEEEECCCCCCCHHHCCCCCCCCCEEEEEECCCEEEECCCEECCCCCCEEECC
AGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGVKFDGGQTNAVVWCSGGRIDV
CCCCEEEEEEEEECCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCCCEEEEECCCEEEE
EVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLI
EECCEEECCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
NKAEDTDRAGVTKISEIRGVNADDAVLTSAFYDETKLSTQEVVIICDNNFKKASSSFVYF
HCCCCCCCCCCEEHHHHCCCCCCHHHEEHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEE
KGKTSSGAITSWYSQNNIDPSNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQ
ECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEECCEEEEEECCEEEEEEEE
FVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVGDTLSAVLSAGSLRFAKEHN
EECCCCCCEEEEEEEEEEEHHHHEEEEEECCCCEEEEECCHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]