Click here to switch to the map view.

The map label for this gene is rfaB [C]

Identifier: 218695658

GI number: 218695658

Start: 2334523

End: 2335746

Strand: Reverse

Name: rfaB [C]

Synonym: EC55989_2291

Alternate gene names: 218695658

Gene position: 2335746-2334523 (Counterclockwise)

Preceding gene: 218695659

Following gene: 218695657

Centisome position: 45.31

GC content: 28.68

Gene sequence:

>1224_bases
ATGAAAAATATACTATTTATTAATAACGCTTTAAGCGGAACAGGTGGGGCTAGAGTTATTCTTAATTTAGCTAAGTCTCT
TCGGGATAGAGGTCATAAAGTAGCATTACTTCTTGATCGCGTTGATAATATACATTATAAAATAGATGATGGGATAGAGA
TTTATGTTAGAGATAAGTTTAAAATAAAAAAAGTGAATCCTACAACTATAAATAAAAATGATTCGCAAGTTTTCTTTACT
AATCAAAGTAATTCTGTTTTTTTTAATTTTATAAAACTATATGCTAAGAAATTAAAGAGTTTTTTTTATTTTTTAAAAGC
TCCATGCGAGATGTATGCATTTAAGAAATTTATTAACACTAAAAAATTTGATGCAATTGTTAATAATAATGTATATGTCA
ATGTTGATAGGATTTATTTTGAGAGTAAATTATCTAATAACTATTACGTCAACTTTCATAACAGTCCAATTGAGATCTTC
AGTAGAAGAGAATTTAGTACTTTGCTTCCATTGAGCAAAATATTTCGTAATGTTAAATTACTTTCTGTATCAAAAGGAAT
TGCAGATGAGTTACTGACCTTAAAAGGTTTCAATGATAAAGAGATTATAACTATATATAATCCTTTTAATTTTACTGAGC
TAGAAGGTAATTCAAGAATTCAATGTGAAGGAAATATACCCTTACCAAAGGAATTTATTGTGACTGTCTCTACATTAACG
GATAGAAAGAGAGTTGATAGAACAATAAAAGCTATGCCCAAAATTATAAGAGAGTATGGAGAAATAGATTTACTTATTAT
TGGCGAAGGACAACTTCGCAATGATTTGCAAAATTTAGTCAAGGAACTTAATATTGAAAAATATGTTCATTTCTTAGGTT
TTCAGACTAATCCATACTATTTTATTAATAAAGCTCAACTTCTAATTTTGAGTTCTGATTCAGAAGGATTACCTACCGTA
ATTATAGAGTCACTAATATTAGGCACGCCGGTATTAAGTACTGATTGTCCTACTGGACCAAATGAAATTCTTGTAAACTG
GGGTGACGAATCATTAGTTTCTCTTACAAAAACCTCTGATGAGAACAATATATGCAATGAGCTTGCCGAAAAAGCCATCA
GACTTTTATGTAAGAAATATGATAAGAAATATGTAAAACATAAATCAGACCTGCAAAGATTCGACGAAAAAAAAATCTCC
ACATCATGGGAGATATTATTTTAA

Upstream 100 bases:

>100_bases
GAAATAACTACTCATATCAATCTATCTTTTCAGATAGCTTTAACTCCGAATTATTTACTCCACGATCATCGGATAGAACA
ATTATCAATCACTAATCTAT

Downstream 100 bases:

>100_bases
TGAATATGTTAAAATATATACAGCCAATATTATCACTTTTATTAAGAATGTTTACTGTTATTTCTTCGTTCCTTTTTAGC
TGGATTGTGGCTCGACTTTT

Product: WbwB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MKNILFINNALSGTGGARVILNLAKSLRDRGHKVALLLDRVDNIHYKIDDGIEIYVRDKFKIKKVNPTTINKNDSQVFFT
NQSNSVFFNFIKLYAKKLKSFFYFLKAPCEMYAFKKFINTKKFDAIVNNNVYVNVDRIYFESKLSNNYYVNFHNSPIEIF
SRREFSTLLPLSKIFRNVKLLSVSKGIADELLTLKGFNDKEIITIYNPFNFTELEGNSRIQCEGNIPLPKEFIVTVSTLT
DRKRVDRTIKAMPKIIREYGEIDLLIIGEGQLRNDLQNLVKELNIEKYVHFLGFQTNPYYFINKAQLLILSSDSEGLPTV
IIESLILGTPVLSTDCPTGPNEILVNWGDESLVSLTKTSDENNICNELAEKAIRLLCKKYDKKYVKHKSDLQRFDEKKIS
TSWEILF

Sequences:

>Translated_407_residues
MKNILFINNALSGTGGARVILNLAKSLRDRGHKVALLLDRVDNIHYKIDDGIEIYVRDKFKIKKVNPTTINKNDSQVFFT
NQSNSVFFNFIKLYAKKLKSFFYFLKAPCEMYAFKKFINTKKFDAIVNNNVYVNVDRIYFESKLSNNYYVNFHNSPIEIF
SRREFSTLLPLSKIFRNVKLLSVSKGIADELLTLKGFNDKEIITIYNPFNFTELEGNSRIQCEGNIPLPKEFIVTVSTLT
DRKRVDRTIKAMPKIIREYGEIDLLIIGEGQLRNDLQNLVKELNIEKYVHFLGFQTNPYYFINKAQLLILSSDSEGLPTV
IIESLILGTPVLSTDCPTGPNEILVNWGDESLVSLTKTSDENNICNELAEKAIRLLCKKYDKKYVKHKSDLQRFDEKKIS
TSWEILF
>Mature_407_residues
MKNILFINNALSGTGGARVILNLAKSLRDRGHKVALLLDRVDNIHYKIDDGIEIYVRDKFKIKKVNPTTINKNDSQVFFT
NQSNSVFFNFIKLYAKKLKSFFYFLKAPCEMYAFKKFINTKKFDAIVNNNVYVNVDRIYFESKLSNNYYVNFHNSPIEIF
SRREFSTLLPLSKIFRNVKLLSVSKGIADELLTLKGFNDKEIITIYNPFNFTELEGNSRIQCEGNIPLPKEFIVTVSTLT
DRKRVDRTIKAMPKIIREYGEIDLLIIGEGQLRNDLQNLVKELNIEKYVHFLGFQTNPYYFINKAQLLILSSDSEGLPTV
IIESLILGTPVLSTDCPTGPNEILVNWGDESLVSLTKTSDENNICNELAEKAIRLLCKKYDKKYVKHKSDLQRFDEKKIS
TSWEILF

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=171, Percent_Identity=26.9005847953216, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 47002; Mature: 47002

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILFINNALSGTGGARVILNLAKSLRDRGHKVALLLDRVDNIHYKIDDGIEIYVRDKF
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCEEEEEECCE
KIKKVNPTTINKNDSQVFFTNQSNSVFFNFIKLYAKKLKSFFYFLKAPCEMYAFKKFINT
EEEECCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
KKFDAIVNNNVYVNVDRIYFESKLSNNYYVNFHNSPIEIFSRREFSTLLPLSKIFRNVKL
HHHHEEECCCEEEEEEEEEEEEECCCCEEEEEECCHHHHHCCCCHHHHCCHHHHHCCEEE
LSVSKGIADELLTLKGFNDKEIITIYNPFNFTELEGNSRIQCEGNIPLPKEFIVTVSTLT
EEECCCHHHHHHEECCCCCCEEEEEECCCCEEEECCCCEEEECCCCCCCHHHEEEEHHHH
DRKRVDRTIKAMPKIIREYGEIDLLIIGEGQLRNDLQNLVKELNIEKYVHFLGFQTNPYY
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCEE
FINKAQLLILSSDSEGLPTVIIESLILGTPVLSTDCPTGPNEILVNWGDESLVSLTKTSD
EEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCC
ENNICNELAEKAIRLLCKKYDKKYVKHKSDLQRFDEKKISTSWEILF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MKNILFINNALSGTGGARVILNLAKSLRDRGHKVALLLDRVDNIHYKIDDGIEIYVRDKF
CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCEEEEEECCE
KIKKVNPTTINKNDSQVFFTNQSNSVFFNFIKLYAKKLKSFFYFLKAPCEMYAFKKFINT
EEEECCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
KKFDAIVNNNVYVNVDRIYFESKLSNNYYVNFHNSPIEIFSRREFSTLLPLSKIFRNVKL
HHHHEEECCCEEEEEEEEEEEEECCCCEEEEEECCHHHHHCCCCHHHHCCHHHHHCCEEE
LSVSKGIADELLTLKGFNDKEIITIYNPFNFTELEGNSRIQCEGNIPLPKEFIVTVSTLT
EEECCCHHHHHHEECCCCCCEEEEEECCCCEEEECCCCEEEECCCCCCCHHHEEEEHHHH
DRKRVDRTIKAMPKIIREYGEIDLLIIGEGQLRNDLQNLVKELNIEKYVHFLGFQTNPYY
HHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCEE
FINKAQLLILSSDSEGLPTVIIESLILGTPVLSTDCPTGPNEILVNWGDESLVSLTKTSD
EEECEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCC
ENNICNELAEKAIRLLCKKYDKKYVKHKSDLQRFDEKKISTSWEILF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]