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The map label for this gene is erfK

Identifier: 218695599

GI number: 218695599

Start: 2277056

End: 2277988

Strand: Reverse

Name: erfK

Synonym: EC55989_2224

Alternate gene names: 218695599

Gene position: 2277988-2277056 (Counterclockwise)

Preceding gene: 218695600

Following gene: 218695598

Centisome position: 44.19

GC content: 49.73

Gene sequence:

>933_bases
ATGCGTCGTGTAAATATTCTTTGCTCATTTGCTCTGCTTTTTGCCAGCCATACTAGCCTGGCGGTAACTTATCCATTACC
TCCAGAGGGTAGCCGTTTGGTGGGGCAGTCGCTTACTGTAACTGTTCCTGATCACAATACCCAGCCGCTGGAGACTTTTG
CCGCACAATACGGGCAAGGGTTAAGTAACATGCTGGAAGCGAATCCGGGCGCTGATGTTTTTTTGCCGAAGCCTGGCTCA
CAACTCACCATTCCGCAGCAACTGATTTTGCCCGCCACTGTTCGTAAAGGGATTGTGGTTAACGTCGCTGAAATGCGTCT
TTATTACTATCCGCCAGACAGTAATACAGTGGAAGTCTTTCCTATTGGTATCGGCCAGGCTGGGCGAGAAACCCCGCGTA
ACTGGGTGACTACCGTTGAACGTAAACAAGAAGCACCAACCTGGACGCCAACGCCGAACACCCGGCGCGAATATGCGAAA
CGAGGGGAGAGTTTGCCCGCATTTGTTCCTGCGGGGCCCGATAACCCCATGGGGCTGTACGCGATTTATATTGGCAGGTT
GTATGCCATCCACGGTACCAATGCCAATTTTGGTATTGGGCTCCGTGTAAGTCAGGGCTGTATTCGTCTGCGTAATGACG
ATATCAAATATCTGTTTGATAATGTTCCTGTAGGCACTCGTGTACAAATTATTGATCAGCCAGTGAAATACACAACGGAA
CCGGATGGTTCAAAGTGGCTGGAAGTTCATGAGCCGCTGTCGCGCAATCGTGCAGAATATGAGTCTGACCGAAAAGTGCC
ATTGCCGGTAACCCCATCTTTGCGGGCGTTTATCAACGGGCAAGAAGTTGATGTAAATCGCGCAAATGCTGCGTTGCAAC
GTCGATCGGGAATGCCTGTGCAAATTAGTTCTGGTTCAAGACAGATGTTTTAA

Upstream 100 bases:

>100_bases
CTACCGGGGAATACGACTTCTGATTTGAACAGTTAAAAACGAAAAGTCTGATAAAAGCTATACTTAACGGATAGCTTTCG
CGACATAGGAAAGGGACATG

Downstream 100 bases:

>100_bases
GAGCGTTGATAATTAGAAAGTAAAAAGCCTGCTCGAAAGCAGGCTTTTTTGAATTTGGCTCCTCTGACTGGACTCGAACC
AGTGACATACGGATTAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKPGS
QLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAK
RGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
PDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF

Sequences:

>Translated_310_residues
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKPGS
QLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAK
RGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
PDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF
>Mature_310_residues
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKPGS
QLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAK
RGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
PDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=310, Percent_Identity=98.7096774193548, Blast_Score=628, Evalue=0.0,
Organism=Escherichia coli, GI1787040, Length=296, Percent_Identity=63.8513513513513, Blast_Score=396, Evalue=1e-112,
Organism=Escherichia coli, GI1787356, Length=285, Percent_Identity=49.1228070175439, Blast_Score=270, Evalue=7e-74,
Organism=Escherichia coli, GI1787968, Length=311, Percent_Identity=45.3376205787781, Blast_Score=247, Evalue=8e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 34358; Mature: 34358

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQG
CCEEHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCCC
LSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVF
HHHHHHCCCCCCEEECCCCCCEECCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEEE
PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY
EECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
EEEEEEEEEEECCCCCEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCC
PDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPV
CCCCCCEEECCCHHCCCHHHHCCCCCCCCCCCCHHHEECCCEEECHHHHHHHHHCCCCCE
QISSGSRQMF
EECCCCCCCC
>Mature Secondary Structure
MRRVNILCSFALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQG
CCEEHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCCC
LSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVF
HHHHHHCCCCCCEEECCCCCCEECCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEEE
PIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLY
EECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCEEE
AIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTE
EEEEEEEEEEECCCCCEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECCCCCCCC
PDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPV
CCCCCCEEECCCHHCCCHHHHCCCCCCCCCCCCHHHEECCCEEECHHHHHHHHHCCCCCE
QISSGSRQMF
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]