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The map label for this gene is ydjN

Identifier: 218695288

GI number: 218695288

Start: 1959568

End: 1960959

Strand: Direct

Name: ydjN

Synonym: EC55989_1896

Alternate gene names: 218695288

Gene position: 1959568-1960959 (Clockwise)

Preceding gene: 218695287

Following gene: 218695290

Centisome position: 38.01

GC content: 52.66

Gene sequence:

>1392_bases
ATGAACTTTCCATTAATTGCGAACATCGTGGTGTTCGTTGTACTGCTGTTTGCGCTGGCTCAGACCCGCCACAAACAGTG
GAGTCTGGCGAAAAAAGTGCTGGTGGGTCTGGTGATGGGTGTGGTTTTTGGCCTTGCCCTGCATACCATTTATGGTTCTG
ACAGCCAGGTACTTAAAGATTCTGTACAGTGGTTTAACATCGTTGGTAACGGCTATGTTCAACTGCTGCAAATGATCGTT
ATGCCGTTAGTCTTCGCCTCTATTCTGAGCGCGGTTGCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCT
GACCATCGGTACGCTTTTGTTTACCACACTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGG
CTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATCGAAAGTAACTATGTTGGTAAAGTCTCTGAC
CTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAAT
TATCAGCGTGGTAATTTTTGCCACATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAAC
GCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTTGTCATGCAGTTGACCCCTTACGGC
GTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTC
CTACCTCGGTCTGCTGATTATGTTTGCAGTGCATGGCATTCTGCTGGGCATTAATGGCGTGAGTCCGCTGAAGTACTTCC
GTAAGGTATGGCCTGTGCTGACGTTTGCCTTTACCAGCCGTTCCAGTGCTGCGTCTATCCCACTGAATGTGGAAGCACAA
ACGCGTCGTCTGGGCGTTCCTGAATCCATCGCCAGTTTCGCCGCCTCTTTCGGTGCAACCATTGGTCAGAACGGCTGCGC
CGGTTTGTATCCGGCAATGCTGGCGGTGATGGTTGCGCCTACGGTTGGCATTAACCCGCTGGACCCGATGTGGATTGCGA
CGCTGGTCGGTATTGTTACCGTTAGTTCCGCAGGCGTTGCCGGTGTCGGTGGTGGTGCAACTTTCGCCGCACTGATTGTG
CTGCCTGCGATGGGCCTGCCAGTAACCCTGGTGGCGCTGTTAATCTCCGTTGAACCGCTTATCGACATGGGCCGTACGGC
GCTAAACGTTAGTGGCTCGATGACAGCTGGCACGCTGACCAGCCAGTGGCTGAAGCAAACCGATAAAGCCATTCTGGATA
GCGAAGACGACGCCGAACTGGCACACCGTTAA

Upstream 100 bases:

>100_bases
TTCCATTTGAATATAAGAGCCAGCTCACAGTTCTGTTAATCTTGCGCCAACACTATGACTGCTACGCAGTGATAGAAATA
ATAAGATCAGGAGAACGGGG

Downstream 100 bases:

>100_bases
TTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCTTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTG
ACTCATATTTAAACAGATCG

Product: putative cation-acid symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFATFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR

Sequences:

>Translated_463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFATFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR
>Mature_463_residues
MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFGLALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIV
MPLVFASILSAVARLHNASQLGKISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFATFLGVAALKLLKDDAPKGERVLAAIDTLQSWVMKLVRLVMQLTPYG
VLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFAVHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQ
TRRLGVPESIASFAASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGGATFAALIV
LPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKAILDSEDDAELAHR

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468564, Length=287, Percent_Identity=30.6620209059233, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI223468566, Length=287, Percent_Identity=30.6620209059233, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI5032093, Length=286, Percent_Identity=30.4195804195804, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI21314632, Length=435, Percent_Identity=26.8965517241379, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI194239697, Length=468, Percent_Identity=23.2905982905983, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI40254478, Length=512, Percent_Identity=25, Blast_Score=89, Evalue=9e-18,
Organism=Homo sapiens, GI66773030, Length=374, Percent_Identity=27.5401069518717, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI169790839, Length=467, Percent_Identity=25.6959314775161, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI4827012, Length=304, Percent_Identity=28.2894736842105, Blast_Score=79, Evalue=7e-15,
Organism=Escherichia coli, GI1788024, Length=463, Percent_Identity=99.5680345572354, Blast_Score=909, Evalue=0.0,
Organism=Escherichia coli, GI1790514, Length=440, Percent_Identity=26.8181818181818, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789947, Length=436, Percent_Identity=22.7064220183486, Blast_Score=114, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71983099, Length=438, Percent_Identity=26.027397260274, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI71983106, Length=438, Percent_Identity=26.027397260274, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI193206505, Length=481, Percent_Identity=24.5322245322245, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI193206654, Length=488, Percent_Identity=25.2049180327869, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17541374, Length=445, Percent_Identity=24.7191011235955, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71996953, Length=467, Percent_Identity=25.0535331905782, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17537407, Length=449, Percent_Identity=24.4988864142539, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24583025, Length=462, Percent_Identity=24.8917748917749, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17137668, Length=462, Percent_Identity=24.8917748917749, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24583023, Length=462, Percent_Identity=24.8917748917749, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 48711; Mature: 48711

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC
>Mature Secondary Structure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HHCCCHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]