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The map label for this gene is ydiS

Identifier: 218695261

GI number: 218695261

Start: 1930027

End: 1931316

Strand: Direct

Name: ydiS

Synonym: EC55989_1867

Alternate gene names: 218695261

Gene position: 1930027-1931316 (Clockwise)

Preceding gene: 218695260

Following gene: 218695262

Centisome position: 37.44

GC content: 54.11

Gene sequence:

>1290_bases
ATGTCGGAAGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCTGGTAGCGTTGCCGCACTGGTCATGGCGCGAGC
CGGGCTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAACATGACCGGCGGGCGTCTTTATGCCCACA
CACTTGAAGCAATCATTCCAGGCTTTGCAGTATCAGCGCCGGTAGAACGCAAGGTCACACGCGAGAAAATCTCCTTCTTA
ACCGAAGAAAGCGCCGTTACCCTCGATTTTCACCGCGAGCAACCAGATGTTCCGCAACACGCATCTTATACCGTATTGCG
TAATCGTCTGGACCCGTGGTTGATGGAACAAGCCGAGCAGGCGGGCGCGCAGTTTATCCCAGGCGTTCGCGTCGATGCGC
TGGTTCGTGAAGGAAACAAGGTCACTGGCGTGCAGGCTGGGGATGATATTCTCGAAGCGAATGTGGTGATTCTGGCTGAT
GGCGTTAACTCGATGCTTGGCCGCTCGCTGGGAATGGTTCCCGCTTCCGATCCGCATCATTACGCTGTTGGTGTTAAAGA
GGTTATTGGCCTCACACCAGAACAGATCAACGATCGCTTTAATATTACGGGCGAGGAAGGTGCCGCCTGGCTGTTTGCCG
GTTCCCCTTCTGACGGCCTGATGGGCGGGGGATTTCTCTATACCAACAAGGATTCCATATCCTTGGGGCTGGTTTGTGGA
TTGGGTGATATCGCCCATGCGCAAAAAAGCGTGCCGCAAATGCTGGAAGATTTTAAACAACACCCCGCCATTCGCCCACT
AATTAGCGGCGGCAAACTGCTTGAATATTCCGCGCATATGGTGCCAGAAGGCGGTCTGGCAATGGTGCCGCAGATGGTTA
ACGATGGCGTGATGATCGTTGGTGACGCCGCAGGCTTCTGCCTGAATTTGGGTTTTACAGTTCGTGGCATGGATTTAGCC
ATTGCATCGGCTCAGGCTGCCGCCACAACGGTGATCGCCGCCAAAGAACGCGAGGATTTCTCCGCCAGCAGTCTGGCGCA
ATACAAACGTGAGCTGGAACAAAGCTGCGTCATGCGCGATATGCAGCATTTCCGCAAGATCCCGGCGCTGATAGAAAACC
CGCGCCTGTTTAGCCAATACCCACGAATGGTCGCCGACATCATGAACGAGATGTTCACCATTGACGGCAAACCAAACCAG
CCGGTACGCAAAATGATCATGGGACATGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGCATTAAGGGAGCAAC
CGCGCTATGA

Upstream 100 bases:

>100_bases
ATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAATTCCCCTTTCAACCACATCTCCCGCTGTAAACGCA
GCGGGAAGGGAGCATAACGC

Downstream 100 bases:

>100_bases
GCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGCCACCCGCATATCATT
CTGGCGGCAAATCCCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSEDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFL
TEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLA
IASAQAAATTVIAAKEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALIENPRLFSQYPRMVADIMNEMFTIDGKPNQ
PVRKMIMGHAKKIGLINLLKDGIKGATAL

Sequences:

>Translated_429_residues
MSEDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFL
TEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLA
IASAQAAATTVIAAKEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALIENPRLFSQYPRMVADIMNEMFTIDGKPNQ
PVRKMIMGHAKKIGLINLLKDGIKGATAL
>Mature_428_residues
SEDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLT
EESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADG
VNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCGL
GDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLAI
ASAQAAATTVIAAKEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALIENPRLFSQYPRMVADIMNEMFTIDGKPNQP
VRKMIMGHAKKIGLINLLKDGIKGATAL

Specific function: Probably accepts electrons from ydiQ/ydiR and reduces a quinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF-QO/fixC family [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=400, Percent_Identity=26.5, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1787991, Length=429, Percent_Identity=98.8344988344988, Blast_Score=871, Evalue=0.0,
Organism=Escherichia coli, GI1786227, Length=429, Percent_Identity=61.5384615384615, Blast_Score=535, Evalue=1e-153,
Organism=Escherichia coli, GI87082155, Length=429, Percent_Identity=42.8904428904429, Blast_Score=337, Evalue=1e-93,
Organism=Caenorhabditis elegans, GI25144720, Length=444, Percent_Identity=25.9009009009009, Blast_Score=118, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6324932, Length=418, Percent_Identity=25.3588516746411, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24652256, Length=407, Percent_Identity=27.027027027027, Blast_Score=119, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.-

Molecular weight: Translated: 45982; Mature: 45850

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP
CCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHH
CCHHCCCCCHHHHHHHCCCEEECCCCCCCCEECCEEEEECCHHHHHHHHCCCCCCCCCCC
YAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG
CCCCHHHHHCCCHHHCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEC
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDGVMIV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHCCCCCCHHHHHHHHCCCEEEE
GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKEREDFSASSLAQYKRELEQSCVMRD
ECCCCEEEECCEEEECCCEEEHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
MQHFRKIPALIENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH
DGIKGATAL
HCCCCCCCC
>Mature Secondary Structure 
SEDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP
CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
GFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHASYTVLRNRLDPWLMEQAEQ
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHH
CCHHCCCCCHHHHHHHCCCEEECCCCCCCCEECCEEEEECCHHHHHHHHCCCCCCCCCCC
YAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG
CCCCHHHHHCCCHHHCCCCEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEC
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQMVNDGVMIV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHCCCCCCHHHHHHHHCCCEEEE
GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKEREDFSASSLAQYKRELEQSCVMRD
ECCCCEEEECCEEEECCCEEEHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
MQHFRKIPALIENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH
DGIKGATAL
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]