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The map label for this gene is ydfI

Identifier: 218695085

GI number: 218695085

Start: 1751835

End: 1753295

Strand: Reverse

Name: ydfI

Synonym: EC55989_1683

Alternate gene names: 218695085

Gene position: 1753295-1751835 (Counterclockwise)

Preceding gene: 218695086

Following gene: 218695081

Centisome position: 34.01

GC content: 49.69

Gene sequence:

>1461_bases
ATGGGAAATAATTTGTTATCAGCAAAAGCGACACTCCCTGTTTATGATCGTAATAACCTGGCCCCAAGAATTATTCATTT
AGGCTTTGGTGCATTTCACCGTGCGCATCAGGGCGTGTATGCCGATATTCTTGCTACAGAACATTTCAGTGACTGGGGAT
ATTATGAGGTCAACTTAATCGGCGGCGAACAGCAAATTGCCGATTTACAACAGCAAGATAATCTTTATACCGTTGCGGAA
ATGTCGGCCGATGCGTGGACGGCTCGCGTCGTTGGCGTCGTTAAAAAAGCCTTGCACGTACAGATGGATGGCTTAGAAAC
CGTGTTGGCTGCGATGTGTGAACCGCAAATCGCGATTGTCTCTCTGACAATCACCGAAAAAGGGTATTTCCACTCTCCGG
CGACCGGACAGTTAATGCTCGATCACCCGATGGTCGCTGCCGACGTGCAAAATCCCCACCAGCCGAAAACAGCAACAGGG
GTGATTGTTGAGGCGCTGGCCCGCCGTAAAGCGGCAGGACTTCCCGCATTTACCGTCATGTCATGTGACAACATGCCAGA
AAACGGTCATGTTATGCGTGACGTTGTCACTTCATACGCGAAAGCCGTTGATGAAAAACTGGCACAATGGATCGAAGATA
ACGTGACTTTCCCATCAACAATGGTGGACCGTATTGTGCCCGCAGTGACAGAGGATACGCTGGCGAAAATCGAACAACTT
ACCGGTGTGGGCGATCCTGCGGGCGTTGCCTGTGAACCTTTCCGCCAGTGGGTAATAGAAGATAACTTTGTTGCCGGACG
TCCAGAATGGGAAAAAGCGGGAGCCGAACTGGTTAGTGATGTGCTGCCTTATGAAGAGATGAAGTTGCGCATGCTCAACG
GCAGTCATTCATTCCTGGCGTATTTGGGTTATCTTGCTGGATATCAGCACATTAATGACTGCATGGAAGATGAACATTAT
CGTTATGCGGCGTATGGCTTGATGTTGCAGGAACAAGCGCCGACGCTGAAAGTGCAGGGCGTTGATTTGCAAGATTACGC
TAACCGATTAATTGCACGCTATAGCAACCCGGCGTTACGTCATCGAACCTGGCAGATTGCGATGGATGGTAGCCAGAAAT
TGCCACAGCGGATGTTGGATTCTGTTCGCTGGCATCTGGCGCATGACAGCAAGTTCGATCTGCTGGCGCTGGGCGTCGCG
GGTTGGATGCGTTATGTCGGTGGTGTTGATGAACAGGGAAATCCGATAGAAATCAGTGACCCACTGTTACCTGTTATTCA
GAAGGCTGTACAAAGTAGTGCCGAAGGGAAAGCGCGCGTCCAGTCATTGCTGGCGATTAAGGCAATCTTTGGTGATGATT
TGCCAGACAATAGCTTGTTTACTGCAAAAGTGACGGAAGCGTACTTGTCTTTATTAGCGCATGGCGCGAAAGCGACCGTG
GCGAAATATTCCGTGAAGTAA

Upstream 100 bases:

>100_bases
AGAAGTCTGTAAACCCTCAATCCCTTCTCTTACCGGAGAGGGGATTTTTATTCATATAACAAAACATATAGCTTGCCATA
TTTAAATTTAAGGAATTGTT

Downstream 100 bases:

>100_bases
AAAAAGCAATGCCGCCATCGGCGGCATTCACACACTTAGTTCATGCCGAGACGAATCAGGTCCAGAGGTGCCAGTTTCTC
TTCACAACCTTCAACAACTA

Product: putative mannonate dehydrogenase

Products: D-fructuronate; NADH [C]

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 485

Protein sequence:

>486_residues
MGNNLLSAKATLPVYDRNNLAPRIIHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAE
MSADAWTARVVGVVKKALHVQMDGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATG
VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAKAVDEKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQL
TGVGDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHY
RYAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVA
GWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTAKVTEAYLSLLAHGAKATV
AKYSVK

Sequences:

>Translated_486_residues
MGNNLLSAKATLPVYDRNNLAPRIIHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAE
MSADAWTARVVGVVKKALHVQMDGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATG
VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAKAVDEKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQL
TGVGDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHY
RYAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVA
GWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTAKVTEAYLSLLAHGAKATV
AKYSVK
>Mature_485_residues
GNNLLSAKATLPVYDRNNLAPRIIHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLIGGEQQIADLQQQDNLYTVAEM
SADAWTARVVGVVKKALHVQMDGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGV
IVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAKAVDEKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQLT
GVGDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYR
YAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAG
WMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTAKVTEAYLSLLAHGAKATVA
KYSVK

Specific function: Unknown

COG id: COG0246

COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787823, Length=486, Percent_Identity=98.1481481481482, Blast_Score=992, Evalue=0.0,
Organism=Escherichia coli, GI1788497, Length=464, Percent_Identity=54.7413793103448, Blast_Score=551, Evalue=1e-158,
Organism=Escherichia coli, GI1790779, Length=472, Percent_Identity=57.6271186440678, Blast_Score=550, Evalue=1e-158,
Organism=Escherichia coli, GI48994885, Length=367, Percent_Identity=27.2479564032698, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1790028, Length=267, Percent_Identity=28.0898876404494, Blast_Score=100, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6324401, Length=488, Percent_Identity=40.5737704918033, Blast_Score=362, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6320765, Length=488, Percent_Identity=40.5737704918033, Blast_Score=362, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR000669
- InterPro:   IPR013118
- InterPro:   IPR023027
- InterPro:   IPR013131
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 53606; Mature: 53475

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00974 MANNITOL_DHGENASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNNLLSAKATLPVYDRNNLAPRIIHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLI
CCCCEEECCCEEEEECCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEE
GGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQMDGLETVLAAMCEPQIAIV
CCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEE
SLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALARRKAAGLPAFTVM
EEEEECCCCCCCCCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
SCDNMPENGHVMRDVVTSYAKAVDEKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQL
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHH
TGVGDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLA
HCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCHHHHHEEEECCCHHHHH
YLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALR
HHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCCCEEEEECCCHHHHHHHHHHHCCCCHHH
HRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISD
CEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECC
PLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTAKVTEAYLSLLAHGAKATV
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCHHHH
AKYSVK
HEECCC
>Mature Secondary Structure 
GNNLLSAKATLPVYDRNNLAPRIIHLGFGAFHRAHQGVYADILATEHFSDWGYYEVNLI
CCCEEECCCEEEEECCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHCCCCCCEEEEEEE
GGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQMDGLETVLAAMCEPQIAIV
CCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEE
SLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATGVIVEALARRKAAGLPAFTVM
EEEEECCCCCCCCCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
SCDNMPENGHVMRDVVTSYAKAVDEKLAQWIEDNVTFPSTMVDRIVPAVTEDTLAKIEQL
ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHH
TGVGDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAELVSDVLPYEEMKLRMLNGSHSFLA
HCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCHHHHHEEEECCCHHHHH
YLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAPTLKVQGVDLQDYANRLIARYSNPALR
HHHHHHHHHHHHHHHCCCCCEEHHHHEEEECCCCEEEEECCCHHHHHHHHHHHCCCCHHH
HRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKFDLLALGVAGWMRYVGGVDEQGNPIEISD
CEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECC
PLLPVIQKAVQSSAEGKARVQSLLAIKAIFGDDLPDNSLFTAKVTEAYLSLLAHGAKATV
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCHHHH
AKYSVK
HEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-mannonate; NAD(+) [C]

Specific reaction: D-mannonate + NAD(+) = D-fructuronate + NADH [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]