Definition Escherichia coli 55989, complete genome.
Accession NC_011748
Length 5,154,862

Click here to switch to the map view.

The map label for this gene is 218694997

Identifier: 218694997

GI number: 218694997

Start: 1637768

End: 1639912

Strand: Direct

Name: 218694997

Synonym: EC55989_1588

Alternate gene names: NA

Gene position: 1637768-1639912 (Clockwise)

Preceding gene: 218694996

Following gene: 218694998

Centisome position: 31.77

GC content: 55.06

Gene sequence:

>2145_bases
ATGTGCGGATTATTATTCATTTTCACGGAGGTTGCTATGTCAACCGGATTACGTTTCACACTGGAAGTGGACGGCCTGCC
GCCGGATGCTTTTGCGGTGGTTTCCTTTCATCTGAACCAGTCACTCTCTTCGCTCTTTTCCCTCGATCTCTCCCTGGTCA
GCCAGCAGTTTCTCTCCCTTGAATTTGCGCAGGTGCTGGACAAAATGGCCTACCTGACGATATGGCAGGGCGATGAAGTA
CAGCGCCGGGTGAAAGGCGTGGTGACCTGGTTTGAACTCGGGGAGAACGACAAAAACCAGATGCTGTACAGCATGAAGGT
GCACCCGCCGCTGTGGCGTGCCGGTCTGCGCCAGAACTTCCGTATCTTCCAGAACGAGGACATCAAAAGCATCCTCGGCA
CGATGTTGCAGGAAAACGGGGTGACCGAATGGAGTCCGCTGTTCAGCGAGCCGCATCCTTCCCGTGAGTTTTGTGTCCAG
TACGGTGAGACTGATTACGATTTCCTGTGCCGGATGGCGGCGGAGGAAGGCATCTTCTTTTATGAGGAGCATGCTTACAA
AAGTACCGACCAGAGCCTGGTGCTGTGCGACACAGTCCGCCATCTGCCCGAATCTTTTGAAATCCCATGGAACCCGAACA
CCCGTACCGAGGTGAGCACCCTCTGCATCAGCCAGTTCCGCTACAGCGCACAAATCCGCCCTTCTTCCGTGGTGACCAAA
GACTACACCTTTAAACGCCCCGGCTGGGCCGGACGTTTTGATCAGGAAGGCCAGCACCAGGATTACCAGCGCACACAGTA
TGAAGTGTATGACTACCCCGGACGTTTCAAGGGGGCCCACGGGCAGAACTTTGCCCGCTGGCAGATGGATGGCTGGCGAA
ACAACGCCGAAGTGGCGCGCGGAACAAGCCGTTCTCCGGAGATATGGCCGGGACGGCGAATTGCGCTGACGGGGCATCCG
CAGGCGAACCTGAACCGGGAATGGCAGGTGGTGGCGAGCGATCTTCACGGCGAACAGCCGCAGGCGGTACCGGGACGCAG
TGGTTCAGGCACCACGCTGAATAATCACTTTGCGGTGATCCCGGCAGACAGAACATGGCGACCACAGCCGTTGCTGAAAC
CGCTGGTGGACGGCCCGCAGAGCGCTGTCGTGACGGGACCGGCAGGCGAGGAAATCTTCTGTGATGAACATGGCCGCGTG
CGGGTGAAATTTAACTGGGACCGTTATAACCCGTCAAACCAGGACAGTTCATGCTGGAGCCGTGTGGCACAGGCGTGGGC
AGGCACCGGATTCGGTAACCTGGCGATACCGCGTGTGGGTCAGGAGGTGATTGTGGACTTCCTCAACGGCGATCCGGACC
AGCCGATCATTTTGGGGCGCACCTACCACCAGGAAAACCGCACACCCGGCAGCCTGCCGGGAACAAAGACGCAGATGACC
ATTCGTTCGAAAACCTATAAGGGCAGCGGGTTTAATGAACTGAAGTTTGACGATGCGACAGGGAAAGAACAGGTCTACAA
CCACGCGCAGAAGAACATGAACACCGAGGTGCTGAATAACCGCACCACTGATGTGATAAACAACCATGCTGAAACCATTG
GCAACAATCAGATGATTGCGGTTACCAACAATCAGATACAGACGGTGGGTGTTAACCAGATAGAGACGGTGGGCAGTAAC
CAGATAATTAAAGTGGGTTCTGTTCAGGTGGAAACGATTGGACTTGTTCGTGCGCTGACCGTGGGCGTGGCGTATCAGAC
GACGGTAGGTGGCATTATGAACACCTCGGTGGCACTGATGCAGTCCTCGCAGATGGGTTTGCATAAATCGTTGAGGGTCG
GGCTGGGTTATGACGTCAAAGTCGGAAATAACGTTACCTTCACCGTTGGTAAAACGAAAAAGGATGATACCGGGCAGACC
GCGATTTACTCCGCCGGTGAGCATCTGGAGCTCTGCTGTGGTAAGGCAAGGCTGGTGCTGACGAAGGACGGACAAATTTT
TCTCAACGGCACAAAAATTCATTTGCAGGGTAAGGAGCAGGTTAATGGTGACTCACTGTTGATTAACTGGAACTGTGCAG
CCTCGAAATCCCCACCGAAGACCCCTGATGAAAAGCAGGATACGCCGGATATGAGAGAGTACTGA

Upstream 100 bases:

>100_bases
GACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATGTCGACTCGCTTATCTCATCCGCC
CGACATGTTGTACATGCAAT

Downstream 100 bases:

>100_bases
TCCCGTACCTGTTCGGAATTCAGTAACAAACCAGCATTAAAAATAAACAGAAGAAGGAATTTGAATCATGAGCGGAAAAC
CAGCGGCGCGTCAGGGAGAT

Product: conserved hypothetical protein, putative VgrG protein, Encoded within repeats that are hotspots for chromosomal duplication formation; Function of protein is unknown

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 714; Mature: 714

Protein sequence:

>714_residues
MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYLTIWQGDEV
QRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQ
YGETDYDFLCRMAAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK
DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGRRIALTGHP
QANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRV
RVKFNWDRYNPSNQDSSCWSRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT
IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNNQIQTVGVNQIETVGSN
QIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALMQSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQT
AIYSAGEHLELCCGKARLVLTKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY

Sequences:

>Translated_714_residues
MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYLTIWQGDEV
QRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQ
YGETDYDFLCRMAAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK
DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGRRIALTGHP
QANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRV
RVKFNWDRYNPSNQDSSCWSRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT
IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNNQIQTVGVNQIETVGSN
QIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALMQSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQT
AIYSAGEHLELCCGKARLVLTKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY
>Mature_714_residues
MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYLTIWQGDEV
QRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQ
YGETDYDFLCRMAAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK
DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGRRIALTGHP
QANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRV
RVKFNWDRYNPSNQDSSCWSRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT
IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNNQIQTVGVNQIETVGSN
QIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALMQSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQT
AIYSAGEHLELCCGKARLVLTKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80056; Mature: 80056

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSL
CCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
EFAQVLDKMAYLTIWQGDEVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNF
HHHHHHHHHEEEEEECCHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHHCCC
RIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFF
EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCEEE
YEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK
EECCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC
DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVAR
CCEECCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHC
GTSRSPEIWPGRRIALTGHPQANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVI
CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCEECCEEEEE
PADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWS
ECCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHH
RVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT
HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEE
IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIA
EEEEEECCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCEEE
VTNNQIQTVGVNQIETVGSNQIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALM
EECCEEEEECCCHHEECCCCCEEEECCEEEEHHHHHHHHHHCEEHHHHHCHHHHHHHHHH
QSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQTAIYSAGEHLELCCGKARLVL
CCCCCCCHHHHEECCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCEEEECCCEEEEE
TKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY
EECCEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSL
CCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
EFAQVLDKMAYLTIWQGDEVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNF
HHHHHHHHHEEEEEECCHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHHCCC
RIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFF
EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCEEE
YEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK
EECCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC
DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVAR
CCEECCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHC
GTSRSPEIWPGRRIALTGHPQANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVI
CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCEECCEEEEE
PADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWS
ECCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHH
RVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT
HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEE
IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIA
EEEEEECCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCEEE
VTNNQIQTVGVNQIETVGSNQIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALM
EECCEEEEECCCHHEECCCCCEEEECCEEEEHHHHHHHHHHCEEHHHHHCHHHHHHHHHH
QSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQTAIYSAGEHLELCCGKARLVL
CCCCCCCHHHHEECCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCEEEECCCEEEEE
TKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY
EECCEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA