| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218694997
Identifier: 218694997
GI number: 218694997
Start: 1637768
End: 1639912
Strand: Direct
Name: 218694997
Synonym: EC55989_1588
Alternate gene names: NA
Gene position: 1637768-1639912 (Clockwise)
Preceding gene: 218694996
Following gene: 218694998
Centisome position: 31.77
GC content: 55.06
Gene sequence:
>2145_bases ATGTGCGGATTATTATTCATTTTCACGGAGGTTGCTATGTCAACCGGATTACGTTTCACACTGGAAGTGGACGGCCTGCC GCCGGATGCTTTTGCGGTGGTTTCCTTTCATCTGAACCAGTCACTCTCTTCGCTCTTTTCCCTCGATCTCTCCCTGGTCA GCCAGCAGTTTCTCTCCCTTGAATTTGCGCAGGTGCTGGACAAAATGGCCTACCTGACGATATGGCAGGGCGATGAAGTA CAGCGCCGGGTGAAAGGCGTGGTGACCTGGTTTGAACTCGGGGAGAACGACAAAAACCAGATGCTGTACAGCATGAAGGT GCACCCGCCGCTGTGGCGTGCCGGTCTGCGCCAGAACTTCCGTATCTTCCAGAACGAGGACATCAAAAGCATCCTCGGCA CGATGTTGCAGGAAAACGGGGTGACCGAATGGAGTCCGCTGTTCAGCGAGCCGCATCCTTCCCGTGAGTTTTGTGTCCAG TACGGTGAGACTGATTACGATTTCCTGTGCCGGATGGCGGCGGAGGAAGGCATCTTCTTTTATGAGGAGCATGCTTACAA AAGTACCGACCAGAGCCTGGTGCTGTGCGACACAGTCCGCCATCTGCCCGAATCTTTTGAAATCCCATGGAACCCGAACA CCCGTACCGAGGTGAGCACCCTCTGCATCAGCCAGTTCCGCTACAGCGCACAAATCCGCCCTTCTTCCGTGGTGACCAAA GACTACACCTTTAAACGCCCCGGCTGGGCCGGACGTTTTGATCAGGAAGGCCAGCACCAGGATTACCAGCGCACACAGTA TGAAGTGTATGACTACCCCGGACGTTTCAAGGGGGCCCACGGGCAGAACTTTGCCCGCTGGCAGATGGATGGCTGGCGAA ACAACGCCGAAGTGGCGCGCGGAACAAGCCGTTCTCCGGAGATATGGCCGGGACGGCGAATTGCGCTGACGGGGCATCCG CAGGCGAACCTGAACCGGGAATGGCAGGTGGTGGCGAGCGATCTTCACGGCGAACAGCCGCAGGCGGTACCGGGACGCAG TGGTTCAGGCACCACGCTGAATAATCACTTTGCGGTGATCCCGGCAGACAGAACATGGCGACCACAGCCGTTGCTGAAAC CGCTGGTGGACGGCCCGCAGAGCGCTGTCGTGACGGGACCGGCAGGCGAGGAAATCTTCTGTGATGAACATGGCCGCGTG CGGGTGAAATTTAACTGGGACCGTTATAACCCGTCAAACCAGGACAGTTCATGCTGGAGCCGTGTGGCACAGGCGTGGGC AGGCACCGGATTCGGTAACCTGGCGATACCGCGTGTGGGTCAGGAGGTGATTGTGGACTTCCTCAACGGCGATCCGGACC AGCCGATCATTTTGGGGCGCACCTACCACCAGGAAAACCGCACACCCGGCAGCCTGCCGGGAACAAAGACGCAGATGACC ATTCGTTCGAAAACCTATAAGGGCAGCGGGTTTAATGAACTGAAGTTTGACGATGCGACAGGGAAAGAACAGGTCTACAA CCACGCGCAGAAGAACATGAACACCGAGGTGCTGAATAACCGCACCACTGATGTGATAAACAACCATGCTGAAACCATTG GCAACAATCAGATGATTGCGGTTACCAACAATCAGATACAGACGGTGGGTGTTAACCAGATAGAGACGGTGGGCAGTAAC CAGATAATTAAAGTGGGTTCTGTTCAGGTGGAAACGATTGGACTTGTTCGTGCGCTGACCGTGGGCGTGGCGTATCAGAC GACGGTAGGTGGCATTATGAACACCTCGGTGGCACTGATGCAGTCCTCGCAGATGGGTTTGCATAAATCGTTGAGGGTCG GGCTGGGTTATGACGTCAAAGTCGGAAATAACGTTACCTTCACCGTTGGTAAAACGAAAAAGGATGATACCGGGCAGACC GCGATTTACTCCGCCGGTGAGCATCTGGAGCTCTGCTGTGGTAAGGCAAGGCTGGTGCTGACGAAGGACGGACAAATTTT TCTCAACGGCACAAAAATTCATTTGCAGGGTAAGGAGCAGGTTAATGGTGACTCACTGTTGATTAACTGGAACTGTGCAG CCTCGAAATCCCCACCGAAGACCCCTGATGAAAAGCAGGATACGCCGGATATGAGAGAGTACTGA
Upstream 100 bases:
>100_bases GACTAAATCATCACATAACCATGACATTTTTCTGATATTCCCCGGTAACGCCAGATGTCGACTCGCTTATCTCATCCGCC CGACATGTTGTACATGCAAT
Downstream 100 bases:
>100_bases TCCCGTACCTGTTCGGAATTCAGTAACAAACCAGCATTAAAAATAAACAGAAGAAGGAATTTGAATCATGAGCGGAAAAC CAGCGGCGCGTCAGGGAGAT
Product: conserved hypothetical protein, putative VgrG protein, Encoded within repeats that are hotspots for chromosomal duplication formation; Function of protein is unknown
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; VgrG-Like Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 714; Mature: 714
Protein sequence:
>714_residues MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYLTIWQGDEV QRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQ YGETDYDFLCRMAAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGRRIALTGHP QANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRV RVKFNWDRYNPSNQDSSCWSRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNNQIQTVGVNQIETVGSN QIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALMQSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQT AIYSAGEHLELCCGKARLVLTKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY
Sequences:
>Translated_714_residues MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYLTIWQGDEV QRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQ YGETDYDFLCRMAAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGRRIALTGHP QANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRV RVKFNWDRYNPSNQDSSCWSRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNNQIQTVGVNQIETVGSN QIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALMQSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQT AIYSAGEHLELCCGKARLVLTKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY >Mature_714_residues MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSLEFAQVLDKMAYLTIWQGDEV QRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNFRIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQ YGETDYDFLCRMAAEEGIFFYEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVARGTSRSPEIWPGRRIALTGHP QANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVIPADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRV RVKFNWDRYNPSNQDSSCWSRVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIAVTNNQIQTVGVNQIETVGSN QIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALMQSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQT AIYSAGEHLELCCGKARLVLTKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80056; Mature: 80056
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSL CCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH EFAQVLDKMAYLTIWQGDEVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNF HHHHHHHHHEEEEEECCHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHHCCC RIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFF EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCEEE YEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK EECCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVAR CCEECCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHC GTSRSPEIWPGRRIALTGHPQANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVI CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCEECCEEEEE PADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWS ECCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHH RVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEE IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIA EEEEEECCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCEEE VTNNQIQTVGVNQIETVGSNQIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALM EECCEEEEECCCHHEECCCCCEEEECCEEEEHHHHHHHHHHCEEHHHHHCHHHHHHHHHH QSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQTAIYSAGEHLELCCGKARLVL CCCCCCCHHHHEECCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCEEEECCCEEEEE TKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY EECCEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCGLLFIFTEVAMSTGLRFTLEVDGLPPDAFAVVSFHLNQSLSSLFSLDLSLVSQQFLSL CCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH EFAQVLDKMAYLTIWQGDEVQRRVKGVVTWFELGENDKNQMLYSMKVHPPLWRAGLRQNF HHHHHHHHHEEEEEECCHHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCHHHHHHHCCC RIFQNEDIKSILGTMLQENGVTEWSPLFSEPHPSREFCVQYGETDYDFLCRMAAEEGIFF EEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCEEE YEEHAYKSTDQSLVLCDTVRHLPESFEIPWNPNTRTEVSTLCISQFRYSAQIRPSSVVTK EECCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEC DYTFKRPGWAGRFDQEGQHQDYQRTQYEVYDYPGRFKGAHGQNFARWQMDGWRNNAEVAR CCEECCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHC GTSRSPEIWPGRRIALTGHPQANLNREWQVVASDLHGEQPQAVPGRSGSGTTLNNHFAVI CCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEHHHCCCCCCCCCCCCCCCCEECCEEEEE PADRTWRPQPLLKPLVDGPQSAVVTGPAGEEIFCDEHGRVRVKFNWDRYNPSNQDSSCWS ECCCCCCCCHHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHH RVAQAWAGTGFGNLAIPRVGQEVIVDFLNGDPDQPIILGRTYHQENRTPGSLPGTKTQMT HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEE IRSKTYKGSGFNELKFDDATGKEQVYNHAQKNMNTEVLNNRTTDVINNHAETIGNNQMIA EEEEEECCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCEEE VTNNQIQTVGVNQIETVGSNQIIKVGSVQVETIGLVRALTVGVAYQTTVGGIMNTSVALM EECCEEEEECCCHHEECCCCCEEEECCEEEEHHHHHHHHHHCEEHHHHHCHHHHHHHHHH QSSQMGLHKSLRVGLGYDVKVGNNVTFTVGKTKKDDTGQTAIYSAGEHLELCCGKARLVL CCCCCCCHHHHEECCCEEEEECCEEEEEECCCCCCCCCCEEEEECCCCEEEECCCEEEEE TKDGQIFLNGTKIHLQGKEQVNGDSLLINWNCAASKSPPKTPDEKQDTPDMREY EECCEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA