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The map label for this gene is ydcK

Identifier: 218694968

GI number: 218694968

Start: 1608003

End: 1608983

Strand: Reverse

Name: ydcK

Synonym: EC55989_1559

Alternate gene names: 218694968

Gene position: 1608983-1608003 (Counterclockwise)

Preceding gene: 218694972

Following gene: 218694965

Centisome position: 31.21

GC content: 48.11

Gene sequence:

>981_bases
ATGCGCAAATATCGTCTAAGTGAAGAACAGCGAGCCTTTAGTTATCAGGAAGATGGCACTAAAAAAAATGTGTTATTACG
GCAGATTATCGCCATTAGCGATTTTAACGATGTGATAGCAGGAACCGCTGGCGGCTGGATCGATCGCGAAACGGTGTTAG
CACAAGAAGGAAATTGCTGGATTTACGACCAGAATGCTATTGCGTTCGGCGGAGCGGTGATTTCCGGTAATACGCGCATC
ACCGGCACCAGCGTGCTGTGGGGAGAGGTTTACGCAACGGATAACGTCTGGATCGATAATAGTGAAATCAGCCAGGGTGC
ATATATAAGTGACAGTGTCACCATTCATGACTCATTAGTTTACGGGCAATGTAGAATATTTGGTCACGCCTTAATTGATC
AACATTCTATGATCGTCGCCGCACAAGGCTTAACGCCCGACCATCAACTCCTGCTCCAAATTTATGATCGCGCAAGGGTT
AGCGCCTCGCGTATTGTCCACCAGGCACAAATTTATGGCGATGCCGTCGTCCGGTATGCTTTTATTGAACATCGCGCCGA
AATTTTTGATTTTGCCAGTGTTGAAGGTAATGAAGAGAACAACGTCTGGCTATGCGATTGCGCTAAAGTCTACGGTCACG
CGCAGGTGAAAGCTGGCATAGAAGAAGATGCCATTCCGACGATTCATTACAGTTCGCAGGTGGCGGAATATGCCATTGTG
GAAGGTAATTGTGTGTTAAAACATCATGTCTTGATTGGCGGAAATGCCGTGGTACGTGGTGGACCGATTCTGCTCGACGA
GCACGTTGTAATACAAGGTGAGAGCCGTATTTCAGGTGCGGTGATAATTGAAAACCATGTGGAGTTAACCGACCACGCCG
TCGTTGAAGCCTTTGATGGCGACACGGTTCATGTCCGTGGTCCAAAAGTCATTAACGGCGAGGAGCGCATTACGCGAACG
CCGCTGGCAGGGTTATTATGA

Upstream 100 bases:

>100_bases
TATAAAGTATATTTGAAATGCATTTTATGGAATTTTCTCGAGCATAGCCAGAGCCGCAGAATTTGCTACGGTTATAGTAA
GTCACCTGTGGGAAAACGCT

Downstream 100 bases:

>100_bases
ATCGATAATACGCGCGTATAAGTTCACATCATCATAGGCATCATTCAGGAACTCAGCCTGTTTCAGGCAACCTTCAAGGA
TAAAACCATTGCGCAAAGCG

Product: putative enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGAVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEIFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRISGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL

Sequences:

>Translated_326_residues
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGAVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEIFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRISGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL
>Mature_326_residues
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCWIYDQNAIAFGGAVISGNTRI
TGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLVYGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARV
SASRIVHQAQIYGDAVVRYAFIEHRAEIFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRISGAVIIENHVELTDHAVVEAFDGDTVHVRGPKVINGEERITRT
PLAGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1787698, Length=326, Percent_Identity=98.7730061349693, Blast_Score=661, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35850; Mature: 35850

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCW
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFGGAVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLV
EEECCCEEECCEEEECCCEEEEEEEEEEEEEECCCEEEECCCCCCCCEECCCEEEEEEEE
YGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYA
EEEEEEEEHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEHRAEIFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
HHHHHHHHEEEEECCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEE
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRISGAVIIENHVELTDHAVVEAFDG
ECCEEEEEEEEECCCEEEECCCEEEECEEEEECCCCCCEEEEEECCCEECCCEEEEECCC
DTVHVRGPKVINGEERITRTPLAGLL
CEEEEECCEEECCCHHEEECCHHCCC
>Mature Secondary Structure
MRKYRLSEEQRAFSYQEDGTKKNVLLRQIIAISDFNDVIAGTAGGWIDRETVLAQEGNCW
CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCEE
IYDQNAIAFGGAVISGNTRITGTSVLWGEVYATDNVWIDNSEISQGAYISDSVTIHDSLV
EEECCCEEECCEEEECCCEEEEEEEEEEEEEECCCEEEECCCCCCCCEECCCEEEEEEEE
YGQCRIFGHALIDQHSMIVAAQGLTPDHQLLLQIYDRARVSASRIVHQAQIYGDAVVRYA
EEEEEEEEHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIEHRAEIFDFASVEGNEENNVWLCDCAKVYGHAQVKAGIEEDAIPTIHYSSQVAEYAIV
HHHHHHHHEEEEECCCCCCCCEEEEEEHHHHCCEEEECCCCCCCCCEEEECCCCEEEEEE
EGNCVLKHHVLIGGNAVVRGGPILLDEHVVIQGESRISGAVIIENHVELTDHAVVEAFDG
ECCEEEEEEEEECCCEEEECCCEEEECEEEEECCCCCCEEEEEECCCEECCCEEEEECCC
DTVHVRGPKVINGEERITRTPLAGLL
CEEEEECCEEECCCHHEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]