| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is ycjT
Identifier: 218694891
GI number: 218694891
Start: 1519608
End: 1521875
Strand: Direct
Name: ycjT
Synonym: EC55989_1480
Alternate gene names: 218694891
Gene position: 1519608-1521875 (Clockwise)
Preceding gene: 218694890
Following gene: 218694892
Centisome position: 29.48
GC content: 53.75
Gene sequence:
>2268_bases ATGACCAGGCCAGTAACGTTATCAGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCATCGCTGATGGCGCAGGG GAACGGCTATCTTGGGCTTCGCGCCAGCCATGAAGAAGATTACACGCGCCAGACGCGAGGGATGTATCTGGCGGGGCTGT ATCATCGGGCGGGAAAAGGTGAAATCAACGAACTGGTGAACCTGCCTGATATCTTGGGGATGGAGATTGCCATAAATGGT GAGGTTTTCTCGTTATCCCGCGAAGCCTGGCAGCGTGAACTTGACTTTGCCAGTGGAGAATTACGCCGTAGCGTTGTCTG GCGTACCAGCAACGGCACAGGTTACACCATCGCCAGCCGTCGCTTTGTTTCGGCAGACCAACTGCCGCTCATTGTGCTGG AAATCACTATTACGCCACTGGACGCCGACGCGTCAGTGCTGATTTCAACAGGTATCGACGCCACGCAAACCAACCACGGT CGCCAACATCTCGACGAAACCCAGGTGCGGGTGTTTGGTCAGCATCTGATGCAGGGGATCTACACCACCCAGGATGGACG CAGTGATGTGGCCATCAGCTGTTGCTGTATGGTGAGCGGTGATGTGCAGCAATGCTATACCGCCAAAGAGCGCCGTTTGC AGCAACATACCAGTGCGCAGCTTCATGCAGGCGAGACAGTGACGTTGCAAAAACTGGTGTGGATCGACTGGCGGGATGAC AGGCAAGCCGTTTTAGACGAGTGGGGCAGCGCGTCGCTTCGCCAGCTTGAAATGTGCGCGCAGCAGAGTTACGACCAACT TCTTGCAGTATCAACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAATGGCGGCGAAGCGCACGATC AGCAAGCGTTAGATTATGCGCTTTATCATCTGCGCATCATGACGCCTGCCCACGACGAGCGCAGCAGCATTGCGGCAAAA GGCTTAACCGGCGAAGGCTACAAAGGCCACGTTTTCTGGGATACAGAAGTATTTTTGTTACCGTTTCATCTGTTTAGCGA TCCGACGGTTGCCCGAAGTTTACTGCGTTATCGCTGGCACAACTTGCCAGGCGCGCAGGAGAAAGCGCGACGCAACGGCT GGCAGGGCGCGCTATTTCCGTGGGAAAGCGCGCGCAGCGGCGAAGAAGAGACGCCGGAATTTGCCGCCATTAACATTCGC ACCGGGCTGCGGCAAAAAGTGGCCTCGGCGCAGGCGGAACATCATCTGGTGGCCGATATCGCCTGGGCGGTTATTCAATA CTGGCAGACCACGGGGGATGAAAGTTTCATTGCGCATGAAGGCATGGCGCTACTTCTGGAAACTGCAAAGTTCTGGATTA GCCGCGCGGTGAGGGTTAACGACCGTCTGGAAATTCATGATGTTATTGGGCCTGACGAATATACCGAACATGTCAATAAT AACGCCTTCACCAGCTATATGGCGTATTACAACGTCCAGCAGGCGCTGAGTATTGCCCGCCAGTTTGGCTGTAGCGACGA TGCGTTTATCCATCGCGCCGAAATGTTCCTTAAAGAACTGCGGCTGCCAGAAATTCAGCCCGACGGCGTTTTGCCGCAGG ATGATTCGTTTATGGCTAAGCCGGCGATTAATCTGGCGAAATACAAAGCGGCGGCGGGGAAGCAAACCATTCTGCTGGAT TATTCACGCGCAGAAGTGAACGAGATGCAAATCCTCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCA GTTCTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACTATTCACGACTCGTCATTAAGTAAAGCAA TCCACGGCATTGTTGCCGCACGCTGTGGCCTGCTGACCCAAAGTTATCAGTTCTGGCGCGAGGGGACTGAAATCGATCTT GGTGCTGATCCGCATAGTTGTGATGATGGTATCCATGCTGCCGCAACTGGCGCTATCTGGCTGGGGGCGATTCAGGGTTT TGCCGGGGTGAGCGTGCGTGACGGTGAATTGCATCTCAATCCGGCGTTACCTGAGCAGTGGCAACAGTTGTCTTTCCCTC TGTTCTGGCAGGGCTGCGAATTACAGGTCACTCTTGACGCGCAGCGTATTGCGATTCGAACTTCTGCGCCCGTTTCACTG CGTTTGAACGGTCAGCTTATATCCGTGGCTGAAGAATCTGTTTTCTGTTTGGGTGATTTTATTTTGCCCTTCAATGGGAC CGCTACCACACATCAGGAGGATGAATGA
Upstream 100 bases:
>100_bases GCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAA ACAGGGACGCGTGTGGAATT
Downstream 100 bases:
>100_bases AACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATCACCGATACCGCGCATCTGCATTTCCAGGCGTGGCAGCAGATT GCCGCTGAAATTGGCATCAG
Product: putative glycosyl hydrolase/phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDILGMEIAING EVFSLSREAWQRELDFASGELRRSVVWRTSNGTGYTIASRRFVSADQLPLIVLEITITPLDADASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCMVSGDVQQCYTAKERRLQQHTSAQLHAGETVTLQKLVWIDWRDD RQAVLDEWGSASLRQLEMCAQQSYDQLLAVSTENWRQWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAK GLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIR TGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN NAFTSYMAYYNVQQALSIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLD YSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDL GADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL RLNGQLISVAEESVFCLGDFILPFNGTATTHQEDE
Sequences:
>Translated_755_residues MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDILGMEIAING EVFSLSREAWQRELDFASGELRRSVVWRTSNGTGYTIASRRFVSADQLPLIVLEITITPLDADASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCMVSGDVQQCYTAKERRLQQHTSAQLHAGETVTLQKLVWIDWRDD RQAVLDEWGSASLRQLEMCAQQSYDQLLAVSTENWRQWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAK GLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIR TGLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN NAFTSYMAYYNVQQALSIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLD YSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDL GADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL RLNGQLISVAEESVFCLGDFILPFNGTATTHQEDE >Mature_754_residues TRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKGEINELVNLPDILGMEIAINGE VFSLSREAWQRELDFASGELRRSVVWRTSNGTGYTIASRRFVSADQLPLIVLEITITPLDADASVLISTGIDATQTNHGR QHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCMVSGDVQQCYTAKERRLQQHTSAQLHAGETVTLQKLVWIDWRDDR QAVLDEWGSASLRQLEMCAQQSYDQLLAVSTENWRQWWQKRRITVNGGEAHDQQALDYALYHLRIMTPAHDERSSIAAKG LTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRT GLRQKVASAQAEHHLVADIAWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNN AFTSYMAYYNVQQALSIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDY SRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLG ADPHSCDDGIHAAATGAIWLGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLR LNGQLISVAEESVFCLGDFILPFNGTATTHQEDE
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=360, Percent_Identity=27.7777777777778, Blast_Score=107, Evalue=5e-23, Organism=Escherichia coli, GI1787575, Length=755, Percent_Identity=97.4834437086093, Blast_Score=1535, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325283, Length=396, Percent_Identity=23.2323232323232, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24583760, Length=393, Percent_Identity=26.2086513994911, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 84873; Mature: 84742
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKG CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEEHHHCCCCC EINELVNLPDILGMEIAINGEVFSLSREAWQRELDFASGELRRSVVWRTSNGTGYTIASR CHHHHCCCCHHCCEEEEECCCEEECCHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECC RFVSADQLPLIVLEITITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGI EEECCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTTQDGRSDVAISCCCMVSGDVQQCYTAKERRLQQHTSAQLHAGETVTLQKLVWIDWRDD EECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCC RQAVLDEWGSASLRQLEMCAQQSYDQLLAVSTENWRQWWQKRRITVNGGEAHDQQALDYA HHHHHHHCCCHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHCCEEECCCCCCHHHHHHHH LYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWH HHEEEEECCCCCCCHHHHCCCCCCCCEEEEEEECCEEEEEEEHHCCCCHHHHHHHHHHHC NLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN HHHHHHHHHCCCCCCEEHHCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHCCC NAFTSYMAYYNVQQALSIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAK CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFY CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCEEC EPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHH LGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL HHHHHCCCCCEEECCEEEECCCCCHHHHHCCCCEEECCCEEEEEECCEEEEEEECCCEEE RLNGQLISVAEESVFCLGDFILPFNGTATTHQEDE EECCEEEEEHHCCEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TRPVTLSEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKG CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEEHHHCCCCC EINELVNLPDILGMEIAINGEVFSLSREAWQRELDFASGELRRSVVWRTSNGTGYTIASR CHHHHCCCCHHCCEEEEECCCEEECCHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECC RFVSADQLPLIVLEITITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGI EEECCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTTQDGRSDVAISCCCMVSGDVQQCYTAKERRLQQHTSAQLHAGETVTLQKLVWIDWRDD EECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCC RQAVLDEWGSASLRQLEMCAQQSYDQLLAVSTENWRQWWQKRRITVNGGEAHDQQALDYA HHHHHHHCCCHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHCCEEECCCCCCHHHHHHHH LYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSDPTVARSLLRYRWH HHEEEEECCCCCCCHHHHCCCCCCCCEEEEEEECCEEEEEEEHHCCCCHHHHHHHHHHHC NLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AWAVIQYWQTTGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNN HHHHHHHHHCCCCCCEEHHCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCHHHHHHCCC NAFTSYMAYYNVQQALSIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAK CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQFSAASCLANLQFY CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCEEC EPRTIHDSSLSKAIHGIVAARCGLLTQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHH LGAIQGFAGVSVRDGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL HHHHHCCCCCEEECCEEEECCCCCHHHHHCCCCEEECCCEEEEEECCEEEEEEECCCEEE RLNGQLISVAEESVFCLGDFILPFNGTATTHQEDE EECCEEEEEHHCCEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]