| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is puuA
Identifier: 218694873
GI number: 218694873
Start: 1501216
End: 1502634
Strand: Reverse
Name: puuA
Synonym: EC55989_1459
Alternate gene names: 218694873
Gene position: 1502634-1501216 (Counterclockwise)
Preceding gene: 218694879
Following gene: 218694872
Centisome position: 29.15
GC content: 53.35
Gene sequence:
>1419_bases ATGGAAACCAATATCGTTGAAGTAGAGAACTTTGTTCAGCAGTCAGAAGAGAGGCGGGGTAGCGCCTTTACGCAGGAAGT GAAACGCTACCTGGAGCGCTACCCGAATACGCAATATGTTGATGTTTTACTTACTGATTTGAATGGTTGCTTCCGTGGAA AACGTATCCCTGTTTCAAGCCTGAAGAAGTTGGAGAAAGGGTGTTATTTCCCGGCCTCGGTGTTTGCAATGGATATTCTG GGCAACGTAGTAGAAGAAGCGGGTCTGGGTCAGGAAATGGGCGAGCCGGATCGTACTTGTGTTCCTGTTCTCGGTTCCTT AACCCCTTCTGCCGCCGATCCAGAGTTTATCGGTCAGATGCTCCTGACCATGGTCGATGAAGATGGCGCTCCCTTTGACG TTGAGCCGCGGAACGTTCTTAACCGCCTGTGGCAGCAGCTACGCCAGCGCGGATTGTTCCCGGTTGTAGCGGTAGAGCTG GAGTTCTATTTACTGGATCGTCAGCGCGACGCTGAAGGGTATCTGCAACCGCCCTGCGCGCCCGGCACCGATGACCGCAA TACACAAAGCCAGGTTTACTCCGTTGATAACCTCAACCACTTCGCCGACGTGCTCAATGATATTGATGAACTGGCGCAGT TACAGTTAATTCCCGCCGACGGTGCGGTCGCCGAAGCCTCGCCGGGTCAGTTTGAAATCAACCTTTACCATACCGATAAC GTGCTGGAAGCCTGCGATGATGCGCTGGCGCTAAAACGCCTGGTGCGTCTGATGGCAGAAAAGCATAAGATGCACGCCAC TTTTATGGCGAAGCCGTATGAAGAGCACGCGGGCAGCGGGATGCATATCCATATCAGTATGCAAAATAATCGTGGCGAGA ATGTGCTTTCTGACACAGAAGGCGAAGATTCGCCGCTGCTGAAAAAGATGCTCGCCGGGATGATTGACCTGATGCCGTCG TCGATGGCGTTGCTGGCACCAAACGTGAACTCGTATCGCCGCTTCCAGCCGGGAATGTATGTGCCGACGCAGGCGTCGTG GGGCCATAACAACCGCACCGTCGCCCTGCGTATTCCGTGCGGCGACCGTCATAATCACCGCGTGGAATATCGCGTGGCGG GTGCCGATGCCAACCCATATCTGGTGATGGCAGCGATTTTTGCCGGTATTTTGCATGGCCTTGATAACGAGCTGCCGTTG CAGGAAGAAGTCGAAGGCAACGGGCTGGAACAGGAAGGCTTACCCTTCCCGATTCGCCAGAGCGATGCCCTGGGTGAGTT TATCGAGAATGATCACCTGCGCCGCTATTTAGGCGAACGGTTTTGCCATGTGTATCACGCCTGTAAAAATGATGAGCTGT TGCAGTTTGAGCGCCTCATCACAGAAACAGAAATTGAGTGGATGTTGAAAAACGCGTAA
Upstream 100 bases:
>100_bases TAACATTTGACAAACATTTAGTTTGCATACAGATTCGAATGGTGGTCATTATATTTTACGCTTTGATAACGAGCGGAAAA CAAACCAAAGGCGAAGAATC
Downstream 100 bases:
>100_bases TTCCCCATGCGGGGTTGTTTCATCGGCCTGAGCGGAGCCAGGCCTGACATTTGCTGGTAATCCAGACATTTCCCGGATGT CGCGTTATGGAGCGCAGGCG
Product: gamma-Glu-putrescine synthase
Products: NA
Alternate protein names: Gamma-Glu-Put synthetase; Glutamate--putrescine ligase [H]
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDIL GNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL EFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN VLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPS SMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPL QEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA
Sequences:
>Translated_472_residues METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDIL GNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL EFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN VLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPS SMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPL QEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA >Mature_472_residues METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDIL GNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL EFYLLDRQRDAEGYLQPPCAPGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN VLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPS SMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPL QEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA
Specific function: Involved in the breakdown of putrescine via the biosynthesis of gamma-L-glutamylputrescine [H]
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=440, Percent_Identity=25.6818181818182, Blast_Score=98, Evalue=2e-20, Organism=Escherichia coli, GI87081870, Length=472, Percent_Identity=99.7881355932203, Blast_Score=978, Evalue=0.0, Organism=Escherichia coli, GI1790301, Length=401, Percent_Identity=26.1845386533666, Blast_Score=93, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.11 [H]
Molecular weight: Translated: 53208; Mature: 53208
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSS CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHH LKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQM HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH LLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCA HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC PGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN CCCCCCCCHHHHEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEECCC VLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCC GEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPC CCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECC GDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQ CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCC SDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure METNIVEVENFVQQSEERRGSAFTQEVKRYLERYPNTQYVDVLLTDLNGCFRGKRIPVSS CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHH LKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVPVLGSLTPSAADPEFIGQM HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH LLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVELEFYLLDRQRDAEGYLQPPCA HHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCCCCCC PGTDDRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIPADGAVAEASPGQFEINLYHTDN CCCCCCCCHHHHEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEECCC VLEACDDALALKRLVRLMAEKHKMHATFMAKPYEEHAGSGMHIHISMQNNRGENVLSDTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCC GEDSPLLKKMLAGMIDLMPSSMALLAPNVNSYRRFQPGMYVPTQASWGHNNRTVALRIPC CCCCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEECC GDRHNHRVEYRVAGADANPYLVMAAIFAGILHGLDNELPLQEEVEGNGLEQEGLPFPIRQ CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCC SDALGEFIENDHLRRYLGERFCHVYHACKNDELLQFERLITETEIEWMLKNA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]