| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218694819
Identifier: 218694819
GI number: 218694819
Start: 1446240
End: 1446938
Strand: Direct
Name: 218694819
Synonym: EC55989_1406
Alternate gene names: NA
Gene position: 1446240-1446938 (Clockwise)
Preceding gene: 218694818
Following gene: 218694820
Centisome position: 28.06
GC content: 58.08
Gene sequence:
>699_bases ATGCAGGATATTCGCGAAGAAAGTCTGAACGAGTCGGTTAAGTCAGAGCAGTCACTGCGGGTGGTACTCTGGGAAATCGA CCTGACGGTACAGGGTGGTGAGCGGTATTTTTTCTGTAATGAGCTGAATGAAAAAGGGGAGCCGGTCACCTGGCAGGGGC GTAAGTATGAGGCATACCCGATTGACGGCAGCGGCTTTGAGATGAACGGCCGGGGCAGCAGTGCCAGACCGTCGCTGACG GTGTCCAATCTGTTCGGTCTGGTCACCGGGATGGCGGAAGACCTGCAGAGTCTGGTGGGGGCCACGGTGGTCCGCCGCCG GGTGTATGCCCGTTTTCTGGATGCGGTGAATTTCGTTGCGGGCAATCCGGAGGCGGACCCGGAGCAGGAGCTGAGTGACC GCTGGGTGGTGGAGCAGATGTCGCAGCTGACAGCCATGACGGCCTCGTTTGTGCTGGCTACACCGACCGAGACGGACGGG GCGCTGTTTCCCGGTCGCATCATGCTGGCGAACACCTGTATGTGGGATTACCGGGGAGATGAATGCGGGTATAACGGTCC TGCGGTGGCGGATGAGTTCGACAACCCCACCACGGATATCCGTAAGGACAGATGCAGCAAGTGCATGCGCGGGTGTGAAC TGCGCAGGAATGTCGGCAATTTTGGCGGTTTCCTTTCCATTAATAAACTTTCGCAGTAA
Upstream 100 bases:
>100_bases ATGCATACCGGCAGATAAAGGTGACCTGTGCCGGGTGGTCTGCACGGGTCGGGATGTTGCGCGTTGAGTTCAGCGCGGAG TTTAAGCAGGTGGTGAACTG
Downstream 100 bases:
>100_bases ATCCCGGTTTATGACACAGACTGAATCAGCGATTCTGGCGCATGCCCGGCGGTGTGCGCCTGCGGAGTCGTGCGGCTTCG TGATAAGCACGCCGGAGGGG
Product: Minor tail protein L
Products: NA
Alternate protein names: Minor Tail Protein L; Minor Tail Protein; Phage Protein; Phage Minor Tail Protein; Phage-Related Minor Tail Protein L; Prophage LambdaSo Minor Tail Protein L; Phage Tail Protein; Gifsy-2 Prophage Minor Tail Protein; Phage Tail Component L-Like Protein; Phage-Related Protein-Like; Minor Tail Fiber Protein L; Phage-Like Protein; Bacteriophage Tail Protein; Gifsy-1 Prophage VmtL; Phage-Related Protein; Gp65 Phage Protein
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MQDIREESLNESVKSEQSLRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLT VSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDG ALFPGRIMLANTCMWDYRGDECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCELRRNVGNFGGFLSINKLSQ
Sequences:
>Translated_232_residues MQDIREESLNESVKSEQSLRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLT VSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDG ALFPGRIMLANTCMWDYRGDECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCELRRNVGNFGGFLSINKLSQ >Mature_232_residues MQDIREESLNESVKSEQSLRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLT VSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDG ALFPGRIMLANTCMWDYRGDECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCELRRNVGNFGGFLSINKLSQ
Specific function: Unknown
COG id: COG4672
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25899; Mature: 25899
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDIREESLNESVKSEQSLRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGRKYEAYP CCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCEEECCCEEEEEE IDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVA CCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDGALFPGRIMLANTCMWDYRGD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEECCCCC ECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCELRRNVGNFGGFLSINKLSQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC >Mature Secondary Structure MQDIREESLNESVKSEQSLRVVLWEIDLTVQGGERYFFCNELNEKGEPVTWQGRKYEAYP CCCHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCEEECCCEEEEEE IDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGATVVRRRVYARFLDAVNFVA CCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDGALFPGRIMLANTCMWDYRGD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEEEEECCCCC ECGYNGPAVADEFDNPTTDIRKDRCSKCMRGCELRRNVGNFGGFLSINKLSQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA