| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
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The map label for this gene is 218694811
Identifier: 218694811
GI number: 218694811
Start: 1440380
End: 1440733
Strand: Direct
Name: 218694811
Synonym: EC55989_1397
Alternate gene names: NA
Gene position: 1440380-1440733 (Clockwise)
Preceding gene: 218694810
Following gene: 218694812
Centisome position: 27.94
GC content: 58.47
Gene sequence:
>354_bases ATGCGTGATTTTCAGAATGCCTTTGATGCTGCCCTCGCCGGGGTGGACAGTACGATCGTTGAAGTGATGGGGCTCTGTGC GCAGTTCACCTCGGGGGCACAGTGTGGCAGCGAAGTTCAGGGGGTTTTTGACGATCCGGAGTCGCTGGGGTTTGCCGGTG GCGGGGTCCGTATTGAAGGAAGCAGCCCGTCATTATTTGTGCGGACGGATACGGTTCGTGCCGTGCGGCGTGGTGACACG CTGACCATTAATGGTGAGACATTCTGGGTGGATCGTGTTTCTCCGGATGACGGGGGCAGCTGTTATCTCTGGCTCAACCG TGGGCAACCACCCGCGGTTAACCGGCGACGATAA
Upstream 100 bases:
>100_bases CCGGAGACAGGTCGTCCCGTTGAGCTGGCGTTACGGGGTATGCGTGTTCTGGTGCCATCATCACTGGCAACGGCCATGAT ACAGCACGGAACGGCTGAAT
Downstream 100 bases:
>100_bases ACGCAGGGTGAATTATGGCGATAAAAGGGCTTGATCAGGCGATTGACAATCTGAGCCGGGTTCGTAAAAACGCCATTCCG GCGGCTTCAGCAATGACGAT
Product: Tail attachment protein (Minor capsid protein FII)
Products: NA
Alternate protein names: Minor Capsid Protein; Gifsy-1 Prophage Minor Capsid Protein FII
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDT LTINGETFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR
Sequences:
>Translated_117_residues MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDT LTINGETFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR >Mature_117_residues MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDPESLGFAGGGVRIEGSSPSLFVRTDTVRAVRRGDT LTINGETFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12561; Mature: 12561
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDPESLGFAGGGVRIEG CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEC SSPSLFVRTDTVRAVRRGDTLTINGETFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR CCCEEEEEECHHHHHHCCCEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MRDFQNAFDAALAGVDSTIVEVMGLCAQFTSGAQCGSEVQGVFDDPESLGFAGGGVRIEG CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEC SSPSLFVRTDTVRAVRRGDTLTINGETFWVDRVSPDDGGSCYLWLNRGQPPAVNRRR CCCEEEEEECHHHHHHCCCEEEECCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA