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The map label for this gene is ycgG

Identifier: 218694679

GI number: 218694679

Start: 1312367

End: 1313890

Strand: Direct

Name: ycgG

Synonym: EC55989_1258

Alternate gene names: 218694679

Gene position: 1312367-1313890 (Clockwise)

Preceding gene: 218694678

Following gene: 218694680

Centisome position: 25.46

GC content: 44.69

Gene sequence:

>1524_bases
ATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTG
GTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCGAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCAC
AAGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCAACCTCGAGGAGCAATATCAGCTTGGCACTGAAGCAGCT
CTGAAACCTCACCTGCGCACAATCATCATTCTCAAACAGGGAATAGTCTGGTGTACATCCCTGCCTGGGAATCGGGTCCT
GTTGTCTCGTATTCCTGTTTTCCCGGACAGTAATTTACTGTTGGCTCCAGCAATCGACACCGTTAATAGATTACCTATCC
TGCTCTATCAGAACCAATTTGCAGATACGCGCATTTTGGTTACGATAAGCGATCAGCATATTCGTGGGGCACTTAATGTA
CCCTTGAAAGGGGTAAGGTATGTATTACGCGTGGCGGATGACATTATTGGACCAACGGGTGATGTGATGACGCTTAATGG
ACATTATCCCTATACCGAGAAGGTTCACTCCACAAAATATCATTTCACTATTATCTTTAACCCGCCGCCACTCTTTAGCT
TCTACAGACTTATCGATAAAGGCTTTGGGATTTTAATATTTATTCTGTTAATCGCCTGCGCCGCTGCCTTCCTGCTTGAT
AGATATTTCAATAAAAGCGCAACGCCTGAAGAGATCCTGCGACGGGCAATAAATAATGGGGAGATCGTCCCTTTTTACCA
ACCTGTGGTAAATGGTCGGGAAGGGACATTGCGGGGAGTTGAGGTGTTAGCCCGCTGGAAACAACCTCACGGTGGATATA
TATCACCCGCGGCATTTATTCCACTTGCTGAAAAATCCGGATTAATCGTTCCGCTTACGCAAAGCCTGATGAATCAGGTT
GCCAGACAGATGAACGCTATCGCGAGTAAATTGCCGGAAGGTTTTCATATTGGAATTAATTTTAGCGCTTCGCATATTAT
TTCGCCGACGTTTGTCGACGAGTGTTTAAATTTCCGTGACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCA
CCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATTCTGCATGAAAATGGTTTTGTCATCGCG
CTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAG
TTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACTTTCGA
TCAGTATCGTCGCTGAAGGTGTCGAAACGAAAGAACAACTTGACTATCTGAACCAAAATAATATCACATTTCAGCAGGGT
TATTATTTCTATAAACCTGTTACATACATCGACCTGGTCAAAATTATCCTTTCTAAACCGAAGGTGAAGGTTGTGGTTGA
GTGA

Upstream 100 bases:

>100_bases
GTGGATATTTCTTATGCTCTCTACCATGCTCTCTGTAGATGCCAGCGCGAGCGAATGAATGGCATTTTCATGTATTAAAC
CCTTTGGCCGGGACAAGCAA

Downstream 100 bases:

>100_bases
AAATTGATCAGTAAGGCCATAGTGCGGTGTAATTATAGACAGCTAATTAGCTCGTTGCCTCTTGTTACTATTGTTCATTA
TTTTGTTTGCTATAATTGTT

Product: conserved hypothetical protein; putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECNLEEQYQLGTEAA
LKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAAFLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE

Sequences:

>Translated_507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECNLEEQYQLGTEAA
LKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAAFLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE
>Mature_507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECNLEEQYQLGTEAA
LKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLLLAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTGDVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAAFLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=507, Percent_Identity=99.8027613412229, Blast_Score=1035, Evalue=0.0,
Organism=Escherichia coli, GI1786507, Length=251, Percent_Identity=44.2231075697211, Blast_Score=207, Evalue=1e-54,
Organism=Escherichia coli, GI1788502, Length=252, Percent_Identity=39.2857142857143, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI87081980, Length=528, Percent_Identity=28.4090909090909, Blast_Score=164, Evalue=2e-41,
Organism=Escherichia coli, GI87081743, Length=295, Percent_Identity=34.5762711864407, Blast_Score=161, Evalue=9e-41,
Organism=Escherichia coli, GI87081921, Length=238, Percent_Identity=34.8739495798319, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790496, Length=279, Percent_Identity=31.5412186379928, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787541, Length=235, Percent_Identity=34.0425531914894, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI226510982, Length=250, Percent_Identity=31.2, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787055, Length=239, Percent_Identity=29.2887029288703, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI87082096, Length=235, Percent_Identity=29.7872340425532, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1788849, Length=258, Percent_Identity=28.6821705426357, Blast_Score=98, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 56858; Mature: 56858

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAV
CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLL
HHCCCCCCCHHHHHCCCHHHHCCHHHEEEEEECCCEEEECCCCCEEEEEECCCCCCCCEE
LAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTG
EECCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAAFLLD
CEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFI
HHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHEE
PLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRD
EECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHHH
SFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHID
HHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCEE
YIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
EEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCEEEECC
YYFYKPVTYIDLVKIILSKPKVKVVVE
EEEECCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAV
CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NIAGKECNLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVFPDSNLL
HHCCCCCCCHHHHHCCCHHHHCCHHHEEEEEECCCEEEECCCCCEEEEEECCCCCCCCEE
LAPAIDTVNRLPILLYQNQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTG
EECCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIACAAAFLLD
CEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFI
HHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHEE
PLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRD
EECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHHH
SFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHID
HHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCEE
YIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNNITFQQG
EEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCEEEECC
YYFYKPVTYIDLVKIILSKPKVKVVVE
EEEECCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]