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The map label for this gene is flgF

Identifier: 218694611

GI number: 218694611

Start: 1243939

End: 1244694

Strand: Direct

Name: flgF

Synonym: EC55989_1190

Alternate gene names: 218694611

Gene position: 1243939-1244694 (Clockwise)

Preceding gene: 218694610

Following gene: 218694612

Centisome position: 24.13

GC content: 59.39

Gene sequence:

>756_bases
ATGGATCACGCAATTTATACCGCGATGGGAGCAGCCAGCCAGACGCTGAATCAACAGGCGGTAACCGCCAGTAATCTGGC
CAATGCCTCTACGCCCGGTTTTCGTGCGCAGTTAAACGCCTTGCGCGCAGTGCCGGTGGAAGGGCTTTCACTGCCTACGC
GCACGCTGGTAACGGCGTCAACACCGGGTGCAGACATGACGCCCGGCAAGATGGATTACACCTCGCGCCCGCTGGACGTT
GCGTTGCAGCAGGATGGTTGGCTGGCCGTGCAGACCGCTGACGGCAGCGAAGGGTATACGCGTAATGGCAGCATTCAGGT
TGATCCCACCGGGCAACTGACAATTCAGGGGCATCCGGTGATAGGCGAGGCGGGGCCAATTGCTGTGCCGGAAGGGGCGG
AAATCACGATAGCTGCCGATGGCACAATCTCGGCGCTGAATCCGGGCGATCCGGCAAATACGGTTGCGCCAGTGGGGCGT
CTGAAGCTGGTGAAAGCCACGGGCAGCGAAGTGCAGCGCGGTGACGACGGCATTTTTCGTTTAAGCGCAGAAACCCAGGC
CACGCGTGGGCCTGTACTGCAGGCAGATCCAACCTTGCGTGTGATGTCGGGTGTTCTGGAAGGCAGTAACGTCAATGCCG
TTGCGGCAATGAGCGACATGATTGCCAGCGCGCGGCGTTTTGAAATGCAGATGAAGGTGATCAGCAGCGTCGATGATAAC
GCAGGCCGTGCCAACCAACTGCTGTCGATGAGTTAA

Upstream 100 bases:

>100_bases
GCCCAGCGTAACTATCAGTCTAACGCCCAGACCATTAAAACCCAGGACCAGATCCTCAACACGCTGGTTAACTTACGCTA
ATCGCTGACGGGATAGCTCA

Downstream 100 bases:

>100_bases
TTGAAAGGATACATGACAAGTATAAGTTGCCCGATGCGCAAGTTTATCGGGTCTATGGGGGCAATCGCAATTTATCGATT
TTGCGAGCACTTGTAGGCCG

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGKMDYTSRPLDV
ALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTIQGHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR
LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDN
AGRANQLLSMS

Sequences:

>Translated_251_residues
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGKMDYTSRPLDV
ALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTIQGHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR
LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDN
AGRANQLLSMS
>Mature_251_residues
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTASTPGADMTPGKMDYTSRPLDV
ALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTIQGHPVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR
LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDN
AGRANQLLSMS

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family

Homologues:

Organism=Escherichia coli, GI1787317, Length=251, Percent_Identity=100, Blast_Score=502, Evalue=1e-144,
Organism=Escherichia coli, GI1787318, Length=250, Percent_Identity=32, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGF_ECOLI (P75938)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   B64851
- RefSeq:   AP_001703.1
- RefSeq:   NP_415595.1
- ProteinModelPortal:   P75938
- IntAct:   P75938
- STRING:   P75938
- EnsemblBacteria:   EBESCT00000004495
- EnsemblBacteria:   EBESCT00000016283
- GeneID:   945639
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1064
- KEGG:   eco:b1077
- EchoBASE:   EB4018
- EcoGene:   EG14270
- eggNOG:   COG4787
- GeneTree:   EBGT00050000009301
- HOGENOM:   HBG579156
- OMA:   FKIQGKG
- ProtClustDB:   PRK12640
- BioCyc:   EcoCyc:FLGF-FLAGELLAR-MOTOR-ROD-PROTEIN
- Genevestigator:   P75938
- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836
- TIGRFAMs:   TIGR03506
- TIGRFAMs:   TIGR02490

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod

EC number: NA

Molecular weight: Translated: 25912; Mature: 25912

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEEEEC
TPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTIQGHPV
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCEEEECCCCE
IGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFR
ECCCCCEECCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCHHHCCCCCEEE
LSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDN
EECCCCCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AGRANQLLSMS
CCCCCCEEECC
>Mature Secondary Structure
MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS
CCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEECCCCCCCCCCEEEEEEC
TPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTIQGHPV
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCEEECCCCEEEECCCCE
IGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIFR
ECCCCCEECCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCHHHCCCCCEEE
LSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDDN
EECCCCCCCCCEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AGRANQLLSMS
CCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503