| Definition | Escherichia coli 55989, complete genome. |
|---|---|
| Accession | NC_011748 |
| Length | 5,154,862 |
Click here to switch to the map view.
The map label for this gene is csgE
Identifier: 218694574
GI number: 218694574
Start: 1212291
End: 1212680
Strand: Reverse
Name: csgE
Synonym: EC55989_1152
Alternate gene names: 218694574
Gene position: 1212680-1212291 (Counterclockwise)
Preceding gene: 218694575
Following gene: 218694573
Centisome position: 23.52
GC content: 42.82
Gene sequence:
>390_bases ATGAAACGTTATTTACGCTGGATTGTGGCGGCAGAATTTCTGTTCGCCGCAGGGAATCTTCACGCCGTTGAGGTAGAAGT CCCGGGATTGTTAACTGACCATACTGTTTCATCTATTGGCCATGATTTTTACCGAGCCTTTAGTGATAAATGGGAAAGTG ACTATACGGGTAACTTAACGATTAATGAAAGGCCCAGTGCACGATGGGGAAGCTGGATCACTATAACGGTCAATCAGGAC GTTATTTTCCAGACTTTTTTATTTCCGTTGAAAAGAGACTTCGAGAAAACTGTCGTCTTTGCACTGATTCAAACTGAAGA AGCACTAAATCGTCGCCAGATAAATCAGGCGTTATTAAGTACGGGCGATTTGGCGCATGATGAATTCTAA
Upstream 100 bases:
>100_bases ACGGTTAAAACGCATCTTTATAATCTTTTCAAGAAGATAGCCGTAAAAAACCGGACACAAGCGGTTTCCTGGGCAAACGA TAACCTCAGGCGATAAAGCC
Downstream 100 bases:
>100_bases ATAAAAAATTGTTCGGAGGCTGCAATGCGTGTCAAACATGCAGTAGTTCTACTCATGCTTATTTCGCCATTAAGTTGGGC TGGAACCATGACTTTCCAGT
Product: curli assembly protein CsgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLTINERPSARWGSWITITVNQD VIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF
Sequences:
>Translated_129_residues MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLTINERPSARWGSWITITVNQD VIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF >Mature_129_residues MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLTINERPSARWGSWITITVNQD VIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLSTGDLAHDEF
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787276, Length=129, Percent_Identity=100, Blast_Score=266, Evalue=2e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018900 [H]
Pfam domain/function: PF10627 CsgE [H]
EC number: NA
Molecular weight: Translated: 14879; Mature: 14879
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT CHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEE INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS ECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGDLAHDEF CCCCCCCCC >Mature Secondary Structure MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSIGHDFYRAFSDKWESDYTGNLT CHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEE INERPSARWGSWITITVNQDVIFQTFLFPLKRDFEKTVVFALIQTEEALNRRQINQALLS ECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TGDLAHDEF CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]